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发育调控的山羊γ-、βC-和βA-珠蛋白基因在染色质中的限制性内切核酸酶可及性。5'区域存在差异,这些区域显示出异常高的序列同源性。

Restriction endonuclease accessibility of the developmentally regulated goat gamma-, beta C-, and beta A-globin genes in chromatin. Differences in 5' regions which show unusually high sequence homology.

作者信息

Liberator P A, Lingrel J B

出版信息

J Biol Chem. 1984 Dec 25;259(24):15497-501.

PMID:6096375
Abstract

The chromatin structure of the developmentally regulated fetal (gamma), preadult (beta C), and adult (beta A) beta-globin genes of the goat has been investigated using a nuclear restriction enzyme accessibility assay. In fetal liver nuclei only the PvuII site immediately proximal to the gamma-globin gene is available for digestion, while the homologous recognition sequences 5' to beta A and beta C are not accessible. Conversely, that site upstream of the beta C transcription unit is exclusively digested in bone marrow nuclei prepared from animals expressing the juvenile form of the protein. In nonerythropoietic tissue none of the PvuII recognition sequences flanking the three genes are digested using identical reaction conditions. These results are particularly striking since the nucleotide sequence extending for hundreds of bases in either direction from this restriction site is remarkably homologous among the three genes. In addition, we have mapped an endogenous nuclease-hypersensitive site approximately 1150 nucleotides 5' to the gamma-globin gene which is evident only in fetal liver tissue.

摘要

利用核限制酶可及性分析方法,对山羊发育调控的胎儿型(γ)、成年前型(βC)和成年型(βA)β-珠蛋白基因的染色质结构进行了研究。在胎儿肝脏细胞核中,只有紧邻γ-珠蛋白基因的PvuII位点可被消化,而βA和βC 5'端的同源识别序列不可及。相反,在表达该蛋白幼年形式的动物制备的骨髓细胞核中,βC转录单元上游的那个位点被专门消化。在非造血组织中,使用相同的反应条件,三个基因侧翼的PvuII识别序列均未被消化。这些结果特别引人注目,因为从这个限制位点向任一方向延伸数百个碱基的核苷酸序列在这三个基因中非常同源。此外,我们在γ-珠蛋白基因5'端约1150个核苷酸处定位了一个内源性核酸酶超敏位点,该位点仅在胎儿肝脏组织中明显。

相似文献

1
Restriction endonuclease accessibility of the developmentally regulated goat gamma-, beta C-, and beta A-globin genes in chromatin. Differences in 5' regions which show unusually high sequence homology.发育调控的山羊γ-、βC-和βA-珠蛋白基因在染色质中的限制性内切核酸酶可及性。5'区域存在差异,这些区域显示出异常高的序列同源性。
J Biol Chem. 1984 Dec 25;259(24):15497-501.
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Chromatin fine-structure mapping of the goat beta F gene in fetal erythroid tissue.山羊βF基因在胎儿红细胞组织中的染色质精细结构图谱分析。
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Hemoglobin switching in sheep: only the gamma gene is in the active conformation in fetal liver but all the beta and gamma genes are in the active conformation in bone marrow.绵羊中的血红蛋白转换:在胎儿肝脏中只有γ基因处于活性构象,但在骨髓中所有β和γ基因都处于活性构象。
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Structure and evolution of goat gamma-, beta C- and beta A-globin genes: three developmentally regulated genes contain inserted elements.山羊γ-、βC-和βA-珠蛋白基因的结构与进化:三个受发育调控的基因含有插入元件。
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The isolation of the beta A-, beta C-, and gamma-globin genes and a presumptive embryonic globin gene from a goat DNA recombinant library.从山羊DNA重组文库中分离出βA-、βC-和γ-珠蛋白基因以及一个假定的胚胎珠蛋白基因。
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Structural organization of the alpha and beta globin loci of the goat.山羊α和β珠蛋白基因座的结构组织
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The nucleotide sequence of rabbit embryonic globin gene beta 3.兔胚胎球蛋白基因β3的核苷酸序列。
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引用本文的文献

1
Unbiased chromatin accessibility profiling by RED-seq uncovers unique features of nucleosome variants in vivo.通过RED-seq进行的无偏倚染色质可及性分析揭示了体内核小体变体的独特特征。
BMC Genomics. 2014 Dec 15;15(1):1104. doi: 10.1186/1471-2164-15-1104.
2
Chromatin fine-structure mapping of the goat beta F gene in fetal erythroid tissue.山羊βF基因在胎儿红细胞组织中的染色质精细结构图谱分析。
Mol Cell Biol. 1987 Aug;7(8):2772-82. doi: 10.1128/mcb.7.8.2772-2782.1987.
3
DNA methylation pattern and restriction endonuclease accessibility in chromatin of a germ-line specific gene, the rainbow trout protamine gene.
种系特异性基因——虹鳟鱼鱼精蛋白基因染色质中的DNA甲基化模式与限制性内切核酸酶可及性
Nucleic Acids Res. 1987 Apr 24;15(8):3385-96. doi: 10.1093/nar/15.8.3385.