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转录活性染色质对粗糙脉孢菌核酸酶和S1核酸酶敏感。

Transcriptionally active chromatin is sensitive to Neurospora crassa and S1 nucleases.

作者信息

Han S, Udvardy A, Schedl P

出版信息

J Mol Biol. 1984 Nov 5;179(3):469-96. doi: 10.1016/0022-2836(84)90076-7.

DOI:10.1016/0022-2836(84)90076-7
PMID:6096552
Abstract

We have examined the distribution of Neurospora crassa and S1 nuclease cleavage products in the chromatin of the 87A7 heat shock locus of Drosophila melanogaster. Both of these nucleases generate single and double-strand breaks in chromatin at specific sites in the 87A7 locus. Before heat induction, we find that the 5' ends of the two 87A7 hsp 70 genes contain N. crassa and S1 nuclease hypersensitive sites, while there are only a few cleavage products from elsewhere in the locus. With N. crassa nuclease, we observe one major 5' fragment, and this is derived from cleavage in a DNA segment mapping about 90 to 115 base-pairs from the beginning of the transcription unit. With S1 nuclease, we find two 5' cleavage products. The first maps about 120 to 130 base-pairs from the beginning of the gene. Interestingly, this site is also sensitive to S1 nuclease in supercoiled but not linear naked DNA. The other fragment maps very close to the transcription start site (approximately 0 to -15 base-pairs). After heat induction, there is a transition in the chromatin architecture of 87A7. First, there is a marked reduction in the yield of the prominent 5' N. crassa and S1 nuclease fragments. Second, the entire hsp 70 gene, as well as the spacer DNA just downstream from the 3' end of the gene, becomes highly sensitive to both of these nucleases.

摘要

我们研究了粗糙脉孢菌(Neurospora crassa)和S1核酸酶切割产物在黑腹果蝇(Drosophila melanogaster)87A7热休克基因座染色质中的分布。这两种核酸酶都会在87A7基因座的特定位点在染色质中产生单链和双链断裂。在热诱导之前,我们发现两个87A7热休克蛋白70(hsp 70)基因的5'端含有粗糙脉孢菌和S1核酸酶超敏感位点,而该基因座其他位置只有少量切割产物。使用粗糙脉孢菌核酸酶时,我们观察到一个主要的5'片段,它来自于转录单元起始处约90至115个碱基对的DNA片段中的切割。使用S1核酸酶时,我们发现两个5'切割产物。第一个位于基因起始处约120至130个碱基对处。有趣的是,该位点在超螺旋而非线性裸DNA中也对S1核酸酶敏感。另一个片段非常靠近转录起始位点(约0至 -15个碱基对)。热诱导后,87A7的染色质结构发生转变。首先,突出的5'粗糙脉孢菌和S1核酸酶片段的产量显著降低。其次,整个hsp 70基因以及基因3'端下游的间隔DNA对这两种核酸酶都变得高度敏感。

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Transcriptionally active chromatin is sensitive to Neurospora crassa and S1 nucleases.转录活性染色质对粗糙脉孢菌核酸酶和S1核酸酶敏感。
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引用本文的文献

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The dynamics of chromatin condensation: redistribution of topoisomerase II in the 87A7 heat shock locus during induction and recovery.染色质凝聚的动力学:诱导和恢复过程中87A7热休克基因座中拓扑异构酶II的重新分布。
Mol Cell Biol. 1993 Dec;13(12):7522-30. doi: 10.1128/mcb.13.12.7522-7530.1993.
2
Sequences required for enhancer blocking activity of scs are located within two nuclease-hypersensitive regions.scs增强子阻断活性所需的序列位于两个核酸酶超敏区域内。
EMBO J. 1994 Dec 15;13(24):5984-93. doi: 10.1002/j.1460-2075.1994.tb06944.x.
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Formation of stable chromatin structures on the histone H4 gene during differentiation in Tetrahymena thermophila.
嗜热四膜虫分化过程中组蛋白H4基因上稳定染色质结构的形成。
Mol Cell Biol. 1986 Aug;6(8):3014-7. doi: 10.1128/mcb.6.8.3014-3017.1986.
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Characterization of a supercoil-dependent S1 sensitive site 5' to the Drosophila melanogaster hsp 26 gene.黑腹果蝇hsp 26基因5'端超螺旋依赖性S1敏感位点的特征分析。
Nucleic Acids Res. 1986 Dec 9;14(23):9425-44. doi: 10.1093/nar/14.23.9425.
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Supercoil induced S1 hypersensitive sites in the rat and human ribosomal RNA genes.超螺旋诱导的大鼠和人类核糖体RNA基因中的S1超敏位点。
Nucleic Acids Res. 1986 Apr 25;14(8):3263-77. doi: 10.1093/nar/14.8.3263.
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Parameters influencing the flow cytometric analysis of DNA sensitivity to nuclease S1.影响DNA对核酸酶S1敏感性的流式细胞术分析的参数。
Histochemistry. 1990;93(4):417-21. doi: 10.1007/BF00315860.
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Chromatin structure, not DNA sequence specificity, is the primary determinant of topoisomerase II sites of action in vivo.染色质结构而非DNA序列特异性,是体内拓扑异构酶II作用位点的主要决定因素。
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