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转录在λtR1处终止于三个簇。

Transcription terminates at lambda tR1 in three clusters.

作者信息

Lau L F, Roberts J W, Wu R

出版信息

Proc Natl Acad Sci U S A. 1982 Oct;79(20):6171-5. doi: 10.1073/pnas.79.20.6171.

DOI:10.1073/pnas.79.20.6171
PMID:6216477
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC347081/
Abstract

Transcription of the rightward operon of bacteriophage lambda terminates in the presence of rho factor at a region known as tR1, located downstream of the structural gene for the lytic repressor cro. We demonstrate by nuclease Sl mapping that transcription termination at lambda tR1 occurs in vitro over a stretch of 60 nucleotides. End points of transcripts are clustered in three distinct regions, which we refer to as termination sites I, II, and III. Termination at site I is inhibited by L factor, whereas termination at sites II and III is not affected by L factor. The sensitivities of these sites to rho factor are in the order III greater than II greater than I. The cin-lcnc-l mutations abolish termination at site II but not at sites I and III; this result may explain the failure of these mutations to alleviate the phage requirement for N function for growth. Although possible stem-and-loop structures in the RNA transcript immediately upstream of each of the three termination sites can be found, no consistent correlation exists between the strengths of these stem-and-loop structures and the termination efficiencies of their respective sites.

摘要

噬菌体λ向右操纵子的转录在ρ因子存在的情况下,于一个名为tR1的区域终止,该区域位于裂解阻遏物cro的结构基因下游。我们通过核酸酶S1作图证明,λ tR1处的转录终止在体外发生在一段60个核苷酸的区域。转录本的端点聚集在三个不同的区域,我们将其称为终止位点I、II和III。位点I的终止受L因子抑制,而位点II和III的终止不受L因子影响。这些位点对ρ因子的敏感性顺序为III大于II大于I。cin-lcnc-1突变消除了位点II的终止,但不影响位点I和III的终止;这一结果可能解释了这些突变未能减轻噬菌体生长对N功能的需求的原因。尽管在三个终止位点中每个位点紧邻的RNA转录本中都可以找到可能的茎环结构,但这些茎环结构的强度与其各自位点的终止效率之间不存在一致的相关性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd42/347081/c0d63b129842/pnas00459-0068-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd42/347081/af5003e8eca1/pnas00459-0066-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd42/347081/c14cdf461c0a/pnas00459-0067-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd42/347081/7ef43c958ebd/pnas00459-0068-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd42/347081/c0d63b129842/pnas00459-0068-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd42/347081/af5003e8eca1/pnas00459-0066-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd42/347081/c14cdf461c0a/pnas00459-0067-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd42/347081/7ef43c958ebd/pnas00459-0068-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd42/347081/c0d63b129842/pnas00459-0068-b.jpg

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本文引用的文献

1
The tyrT locus: termination and processing of a complex transcript.tyrT基因座:一个复杂转录本的终止与加工
Cell. 1981 Nov;26(3 Pt 1):305-14. doi: 10.1016/0092-8674(81)90199-9.
2
Synthetic sites for transcription termination and a functional comparison with tryptophan operon termination sites in vitro.转录终止的合成位点及其与色氨酸操纵子终止位点在体外的功能比较。
Proc Natl Acad Sci U S A. 1981 Jul;78(7):4180-4. doi: 10.1073/pnas.78.7.4180.
3
Termination of transcription and its regulation in the tryptophan operon of E. coli.大肠杆菌色氨酸操纵子中的转录终止及其调控。
Proc Natl Acad Sci U S A. 2014 May 13;111(19):E1999-2007. doi: 10.1073/pnas.1319193111. Epub 2014 Apr 28.
4
The Sm-like RNA chaperone Hfq mediates transcription antitermination at Rho-dependent terminators.Sm 样 RNA 伴侣蛋白 Hfq 介导 Rho 依赖性终止子处的转录抗终止。
EMBO J. 2011 Jun 14;30(14):2805-16. doi: 10.1038/emboj.2011.192.
5
Compromised factor-dependent transcription termination in a nusA mutant of Escherichia coli: spectrum of termination efficiencies generated by perturbations of Rho, NusG, NusA, and H-NS family proteins.大肠杆菌 nusA 突变体中受影响的因子依赖性转录终止:通过扰乱 Rho、NusG、NusA 和 H-NS 家族蛋白产生的终止效率谱。
J Bacteriol. 2011 Aug;193(15):3842-50. doi: 10.1128/JB.00221-11. Epub 2011 May 20.
6
Potent transcriptional interference by pausing of RNA polymerases over a downstream promoter.RNA聚合酶在下游启动子处暂停引发的强效转录干扰。
Mol Cell. 2009 Jun 12;34(5):545-55. doi: 10.1016/j.molcel.2009.04.018.
7
In vitro approaches to analysis of transcription termination.转录终止分析的体外方法。
Methods. 2009 Jan;47(1):37-43. doi: 10.1016/j.ymeth.2008.10.006. Epub 2008 Oct 21.
8
Characterization of the detachable Rho-dependent transcription terminator of the fimE gene in Escherichia coli K-12.大肠杆菌K-12中fimE基因可分离的Rho依赖性转录终止子的特性分析
J Bacteriol. 2005 Dec;187(24):8256-66. doi: 10.1128/JB.187.24.8256-8266.2005.
9
Suppression of factor-dependent transcription termination by antiterminator RNA.抗终止子RNA对因子依赖性转录终止的抑制作用。
J Bacteriol. 2003 Dec;185(24):7085-91. doi: 10.1128/JB.185.24.7085-7091.2003.
10
Expression of different-size transcripts from the clpP-clpX operon of Escherichia coli during carbon deprivation.大肠杆菌clpP-clpX操纵子在碳源缺乏时不同大小转录本的表达
J Bacteriol. 2000 Dec;182(23):6630-7. doi: 10.1128/JB.182.23.6630-6637.2000.
Cell. 1981 Apr;24(1):10-23. doi: 10.1016/0092-8674(81)90496-7.
4
Attenuation in the control of expression of bacterial operons.细菌操纵子表达调控中的衰减作用。
Nature. 1981 Feb 26;289(5800):751-8. doi: 10.1038/289751a0.
5
Regulation of transcription termination by the N gene protein of bacteriophage lambda.噬菌体λ N基因蛋白对转录终止的调控
Cell. 1981 Apr;24(1):8-9. doi: 10.1016/0092-8674(81)90495-5.
6
Procedure for purification of Escherichia coli ribonucleic acid synthesis termination protein rho.大肠杆菌核糖核酸合成终止蛋白ρ的纯化步骤
Biochemistry. 1981 Mar 17;20(6):1640-5. doi: 10.1021/bi00509a036.
7
The lysis-lysogeny decision of phage lambda: explicit programming and responsiveness.噬菌体λ的裂解-溶原决定:明确的编程与响应性
Annu Rev Genet. 1980;14:399-445. doi: 10.1146/annurev.ge.14.120180.002151.
8
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J Biol Chem. 1980 Nov 25;255(22):11017-22.
9
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J Biol Chem. 1980 Nov 25;255(22):11011-6.
10
Control of transcription termination: a rho-dependent termination site in bacteriophage lambda.转录终止的调控:噬菌体λ中的一个ρ因子依赖性终止位点
J Mol Biol. 1980 Apr;138(2):231-54. doi: 10.1016/0022-2836(80)90285-5.