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人类核糖体DNA的结构与变异:克隆片段的分子分析

Structure and variation of human ribosomal DNA: molecular analysis of cloned fragments.

作者信息

Erickson J M, Rushford C L, Dorney D J, Wilson G N, Schmickel R D

出版信息

Gene. 1981 Dec;16(1-3):1-9. doi: 10.1016/0378-1119(81)90055-x.

DOI:10.1016/0378-1119(81)90055-x
PMID:6282683
Abstract

Eco-RI-A fragments of the human ribosomal RNA gene family from two types of tissue and three individuals were cloned in lambda vectors and compared by restriction enzyme digestion and electron microscopy. The EcoRI fragment A contains (i) 0.2 kb of the 3' end of the 18S rDNA, (ii) 2.5 kb of internal transcribed spacer and the 5.8S rDNA, and (iii) 4.6 kb of the 28S rDNA gene. All of the six cloned rDNA fragments isolated are identical by these analyses. Moreover, all contain a HincII site that is absent in about 50% of the rDNA identified by genomic blotting. Polymorphism in the nontranscribed spacer rDNA was studied in genomic blots of BamHI-digested DNA, using the 3' end of the 28S rDNA as a probe. The boundaries between the 18S rDNA, internal transcribed spacer, 28s rDNA, and external nontranscribed spacer were determined by R-loop analysis, further defining the organization of the ribosomal RNA precursor.

摘要

从两种组织和三个个体中获取的人类核糖体RNA基因家族的Eco-RI-A片段被克隆到λ载体中,并通过限制性内切酶消化和电子显微镜进行比较。EcoRI片段A包含:(i)18S rDNA 3'端的0.2 kb,(ii)2.5 kb的内部转录间隔区和5.8S rDNA,以及(iii)28S rDNA基因的4.6 kb。通过这些分析,分离出的六个克隆rDNA片段均相同。此外,所有片段都含有一个HincII位点,而在通过基因组印迹鉴定的约50%的rDNA中不存在该位点。使用28S rDNA的3'端作为探针,在BamHI消化的DNA的基因组印迹中研究了非转录间隔区rDNA的多态性。通过R环分析确定了18S rDNA、内部转录间隔区、28S rDNA和外部非转录间隔区之间的边界,进一步明确了核糖体RNA前体的组织形式。

相似文献

1
Structure and variation of human ribosomal DNA: molecular analysis of cloned fragments.人类核糖体DNA的结构与变异:克隆片段的分子分析
Gene. 1981 Dec;16(1-3):1-9. doi: 10.1016/0378-1119(81)90055-x.
2
A new type of EcoRI polymorphism of the human ribosomal DNA repeating unit revealed by analysis of cloned DNA fragments.通过对克隆的DNA片段进行分析揭示的人类核糖体DNA重复单位的一种新型EcoRI多态性。
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Cloning and determination of the transcription termination site of ribosomal RNA gene of the mouse.小鼠核糖体RNA基因的克隆及转录终止位点的确定
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Structural organization of rat ribosomal genes restriction endonuclease analysis of genomic and cloned ribosomal DNAs.大鼠核糖体基因的结构组织:基因组和克隆核糖体DNA的限制性内切酶分析
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Organization of ribosomal RNA gene repeats of the mouse.小鼠核糖体RNA基因重复序列的组织
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Characterization of a cloned ribosomal fragment from mouse which contains the 18S coding region and adjacent spacer sequences.对从小鼠中克隆出的包含18S编码区及相邻间隔序列的核糖体片段的表征。
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The genes for 18S, 5.8S and 28S ribosomal RNA of Bombyx mori are organized into tandem repeats of uniform length.家蚕18S、5.8S和28S核糖体RNA的基因被组织成长度一致的串联重复序列。
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