• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

[人类红细胞糖酵解和腺嘌呤核苷酸代谢的数学模型。I. 反应动力学表述、体内状态分析及体外实验起始条件的确定]

[Mathematical modelling of glycolysis and adenine nucleotide metabolism of human erythrocytes. I. Reaction-kinetic statements, analysis of in vivo state and determination of starting conditions for in vitro experiments].

作者信息

Schauer M, Heinrich R, Rapoport S M

出版信息

Acta Biol Med Ger. 1981;40(12):1659-82.

PMID:6285649
Abstract

A mathematical model of energy metabolism of human red cells is presented, which includes besides the glycolytic reactions the adenine nucleotide metabolism. The model is based on the network of chemical reactions, the thermodynamic equilibrium constants of fast reversible reactions and on the kinetic equations for irreversible enzyme reactions. The model consists of a system of 16 differential equations and allows the mathematical evaluation of metabolic levels in the steady state of energy metabolism corresponding to the in vivo state erythrocytes with the kinetic data for the enzymes derived from in vitro experiments. The dependence of the levels of metabolites in the steady state on the activity of some enzymes is analysed to characterize the regulatory properties of the system. The comparison of the steady state levels of the model with experimental data makes it possible to estimate values of some controversial enzyme parameters. Estimates of the kinetic parameters of the following intracellular processes are presented: 1) rate constant of AMP-phosphatase, 2) maximum rate of adenylate deaminase, 3) activity of adenine phosphoribosylpyrophosphate transferase and 4) adenosine transport through the cell membrane. The simulation of the preparatory phase before incubation of erythrocytes indicates, that the model also permits to compute the time course of changes of levels of metabolites. To solve the initial problem the stiff differential equation system is integrated numerically by an efficient program without the application of the quasi-steady-state approximation.

摘要

本文提出了一个人类红细胞能量代谢的数学模型,该模型除了糖酵解反应外,还包括腺嘌呤核苷酸代谢。该模型基于化学反应网络、快速可逆反应的热力学平衡常数以及不可逆酶反应的动力学方程。该模型由一个包含16个微分方程的系统组成,能够根据体外实验得出的酶动力学数据,对与体内红细胞状态相对应的能量代谢稳态下的代谢水平进行数学评估。分析了稳态下代谢物水平对某些酶活性的依赖性,以表征该系统的调节特性。将模型的稳态水平与实验数据进行比较,可以估计一些有争议的酶参数值。给出了以下细胞内过程动力学参数的估计值:1)AMP磷酸酶的速率常数;2)腺苷酸脱氨酶的最大速率;3)腺嘌呤磷酸核糖焦磷酸转移酶的活性;4)腺苷通过细胞膜的转运。红细胞孵育前准备阶段的模拟表明,该模型还能够计算代谢物水平变化的时间进程。为了解决初始问题,通过一个高效程序对刚性微分方程组进行数值积分,而不应用准稳态近似。

相似文献

1
[Mathematical modelling of glycolysis and adenine nucleotide metabolism of human erythrocytes. I. Reaction-kinetic statements, analysis of in vivo state and determination of starting conditions for in vitro experiments].[人类红细胞糖酵解和腺嘌呤核苷酸代谢的数学模型。I. 反应动力学表述、体内状态分析及体外实验起始条件的确定]
Acta Biol Med Ger. 1981;40(12):1659-82.
2
[Mathematical modelling of glycolysis and of adenine nucleotide metabolism of human erythrocytes. II. Simulation of adenine nucleotide breakdown following glucose depletion].[人类红细胞糖酵解及腺嘌呤核苷酸代谢的数学模型。II. 葡萄糖耗尽后腺嘌呤核苷酸分解的模拟]
Acta Biol Med Ger. 1981;40(12):1683-97.
3
A kinetic model for the interaction of energy metabolism and osmotic states of human erythrocytes. Analysis of the stationary "in vivo" state and of time dependent variations under blood preservation conditions.人体红细胞能量代谢与渗透状态相互作用的动力学模型。对“体内”稳态及血液保存条件下随时间变化情况的分析。
Biomed Biochim Acta. 1985;44(2):185-212.
4
The regulatory principles of glycolysis in erythrocytes in vivo and in vitro. A minimal comprehensive model describing steady states, quasi-steady states and time-dependent processes.体内和体外红细胞糖酵解的调节原理。一个描述稳态、准稳态和时间依赖性过程的最小综合模型。
Biochem J. 1976 Feb 15;154(2):449-69. doi: 10.1042/bj1540449.
5
A possible role of adenylate metabolism in human erythrocytes: simple mathematical model.腺苷酸代谢在人类红细胞中的可能作用:简单数学模型
J Theor Biol. 1996 Mar 7;179(1):75-86. doi: 10.1006/jtbi.1996.0050.
6
Mathematical models of metabolic systems: general principles and control of glycolysis and membrane transport in erythrocytes.代谢系统的数学模型:红细胞糖酵解和膜转运的一般原理及调控
Biomed Biochim Acta. 1985;44(6):913-27.
7
Model of 2,3-bisphosphoglycerate metabolism in the human erythrocyte based on detailed enzyme kinetic equations: in vivo kinetic characterization of 2,3-bisphosphoglycerate synthase/phosphatase using 13C and 31P NMR.基于详细酶动力学方程的人红细胞中2,3-二磷酸甘油酸代谢模型:使用13C和31P NMR对2,3-二磷酸甘油酸合酶/磷酸酶进行体内动力学表征
Biochem J. 1999 Sep 15;342 Pt 3(Pt 3):567-80.
8
The energy metabolism of pyruvate kinase deficient red blood cells.丙酮酸激酶缺乏的红细胞的能量代谢。
Biomed Biochim Acta. 1983;42(11-12):S268-72.
9
A kinetic study of a ternary cycle between adenine nucleotides.腺嘌呤核苷酸之间三元循环的动力学研究。
FEBS J. 2006 Aug;273(15):3598-613. doi: 10.1111/j.1742-4658.2006.05366.x.
10
[Mathematical model for energy metabolism in erythrocytes. Independence of scaled glycolytic characteristics of individual features of the donors].[红细胞能量代谢的数学模型。供体个体特征对糖酵解特征缩放的独立性]
Biokhimiia. 1980 Jul;45(7):1267-73.

引用本文的文献

1
Metabolomics in transfusion medicine.输血医学中的代谢组学。
Transfusion. 2016 Apr;56(4):980-93. doi: 10.1111/trf.13442. Epub 2015 Dec 12.
2
iAB-RBC-283: A proteomically derived knowledge-base of erythrocyte metabolism that can be used to simulate its physiological and patho-physiological states.iAB-RBC-283:一个通过蛋白质组学获得的红细胞代谢知识库,可用于模拟其生理和病理生理状态。
BMC Syst Biol. 2011 Jul 12;5:110. doi: 10.1186/1752-0509-5-110.
3
Mass action stoichiometric simulation models: incorporating kinetics and regulation into stoichiometric models.
质量作用化学计量模拟模型:将动力学和调控纳入化学计量模型。
Biophys J. 2010 Jan 20;98(2):175-85. doi: 10.1016/j.bpj.2009.09.064.
4
Towards the engineering of in vitro systems.迈向体外系统工程
J R Soc Interface. 2009 Aug 6;6 Suppl 4(Suppl 4):S507-21. doi: 10.1098/rsif.2009.0110.focus. Epub 2009 May 27.
5
Dynamic simulation of red blood cell metabolism and its application to the analysis of a pathological condition.红细胞代谢的动态模拟及其在病理状态分析中的应用。
Theor Biol Med Model. 2005 May 9;2:18. doi: 10.1186/1742-4682-2-18.
6
In silico model-driven assessment of the effects of single nucleotide polymorphisms (SNPs) on human red blood cell metabolism.单核苷酸多态性(SNP)对人类红细胞代谢影响的计算机模型驱动评估。
Genome Res. 2002 Nov;12(11):1687-92. doi: 10.1101/gr.329302.
7
A theoretical approach to the evolution and structural design of enzymatic networks: linear enzymatic chains, branched pathways and glycolysis of erythrocytes.酶网络进化与结构设计的理论方法:线性酶链、分支途径及红细胞糖酵解
Bull Math Biol. 1987;49(5):539-95. doi: 10.1016/s0092-8240(87)90003-6.
8
Determination of Flux Control Coefficients from transient metabolite concentrations.根据瞬态代谢物浓度确定通量控制系数。
Biochem J. 1992 Mar 15;282 ( Pt 3)(Pt 3):919-27. doi: 10.1042/bj2820919.