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利用通量比测量法确定酶促反应中底物和产物的添加顺序。

Use of flux ratio measurements for the determination of the order of addition of substrates and products in enzyme reactions.

作者信息

Britton H G, Dann L G

出版信息

Biochem J. 1978 Jan 1;169(1):29-37. doi: 10.1042/bj1690029.

DOI:10.1042/bj1690029
PMID:629751
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1184191/
Abstract
  1. Methods of determining the order of addition of substrates and dissociation of products by using flux ratios are investigated. Where an enzyme obeys hyperbolic steady-state velocity kinetics it is concluded that it may be particularly useful to compare the measured flux ratios with those calculated from the steady-state velocity parameters. 2. An expression is derived relating the relative contribution of the two pathways in a branched pathway to the flux ratios. 3. The relationship of equilibrium-reaction-rate measurements [Boyer & Silverstein (1963) Acta Chem. Scand. 17, Suppl. 1, S195] to the flux ratios is considered. Equilibrium-reaction rates are shown to be affected both by the addition of substrates and dissociation of products. Methods of analysing the data to distinguish between these events are discussed. 4. Methods of measurement of flux ratios are described, and it is concluded that the non-equilibrium steady-state method is preferable to measurements at chemical equilibrium. 5. The relative significance of flux ratio measurements and steady-state velocity inhibition data is discussed. It is concluded that flux ratios, when taken in conjunction with the inhibition data, provide the least ambiguous information about mechanism.
摘要
  1. 研究了通过通量比来确定底物添加顺序和产物解离顺序的方法。对于服从双曲线稳态速度动力学的酶,得出结论:将测得的通量比与根据稳态速度参数计算出的通量比进行比较可能特别有用。2. 推导了一个表达式,该表达式将分支途径中两条途径的相对贡献与通量比联系起来。3. 考虑了平衡反应速率测量[博耶尔和西尔弗斯坦(1963年)《化学学报》17卷,增刊1,S195]与通量比的关系。结果表明,平衡反应速率受底物添加和产物解离的影响。讨论了分析数据以区分这些事件的方法。4. 描述了通量比的测量方法,并得出结论:非平衡稳态方法优于化学平衡时的测量方法。5. 讨论了通量比测量和稳态速度抑制数据的相对重要性。得出结论:通量比与抑制数据结合使用时,能提供关于机制的最明确信息。

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引用本文的文献

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Use of transient and steady- state measurements of the unidirectional flux ratio for the determination of the free energy change of chemical reactions and active transport systems.利用单向通量比的瞬态和稳态测量来确定化学反应和主动运输系统的自由能变化。
Bull Math Biol. 1980;42(4):529-37. doi: 10.1007/BF02460968.
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Alternative to the steady-state method: derivation of reaction rates from first-passage times and pathway probabilities.稳态方法的替代方法:从首次通过时间和路径概率推导反应速率。
Proc Natl Acad Sci U S A. 1987 Feb;84(3):663-7. doi: 10.1073/pnas.84.3.663.
3
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本文引用的文献

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The kinetics of enzyme-catalyzed reactions with two or more substrates or products. II. Inhibition: nomenclature and theory.具有两种或更多种底物或产物的酶催化反应动力学。II. 抑制作用:命名法与理论
Biochim Biophys Acta. 1963 Feb 12;67:173-87. doi: 10.1016/0006-3002(63)91815-8.
2
The kinetics of enzyme-catalyzed reactions with two or more substrates or products. I. Nomenclature and rate equations.具有两种或更多种底物或产物的酶催化反应动力学。I. 命名法和速率方程。
Biochim Biophys Acta. 1963 Jan 8;67:104-37. doi: 10.1016/0006-3002(63)91800-6.
3
Uses and limitations of measurements of rates of isotopic exchange and incorporation in catalyzed reactions.催化反应中同位素交换和掺入速率测量的用途及局限性。
Arch Biochem Biophys. 1959 Jun;82(2):387-410. doi: 10.1016/0003-9861(59)90136-5.
4
Inhibition of spleen diphosphopyridine nucleotidase by nicotinamide, an exchange reaction.烟酰胺对脾二磷酸吡啶核苷酸酶的抑制作用,一种交换反应。
J Biol Chem. 1953 Jan;200(1):197-212.
5
The concept and use of flux measurements in enzyme studies. A theoretical analysis.酶研究中通量测量的概念与应用。理论分析。
Arch Biochem Biophys. 1966 Oct;117(1):167-83. doi: 10.1016/0003-9861(66)90140-8.
6
Product inhibition of the hexokinases.
J Biol Chem. 1970 Jan 10;245(1):198-204.
7
Methods of determining rate constants in single-substrate-single-product enzyme reactions. Use of induced transport: limitations of product inhibition.单底物-单产物酶促反应中速率常数的测定方法。诱导转运的应用:产物抑制的局限性。
Biochem J. 1973 Jun;133(2):255-61. doi: 10.1042/bj1330255.
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Kinetics and mechanism of action of muscle pyruvate kinase.肌肉丙酮酸激酶的动力学及作用机制
Biochem J. 1978 Jan 1;169(1):39-54. doi: 10.1042/bj1690039.