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酶促反应中稳态速率方程以及底物与产物之间通量的计算。

Calculation of steady-state rate equations and the fluxes between substrates and products in enzyme reactions.

作者信息

Britton H G

出版信息

Biochem J. 1977 Mar 1;161(3):517-26. doi: 10.1042/bj1610517.

DOI:10.1042/bj1610517
PMID:851429
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1164536/
Abstract
  1. Two methods are described for deriving the steady-state velocity of an enzyme reaction from a consideration of fluxes between enzyme intermediates. The equivalent-reaction technique, in which enzyme intermediates are systematically eliminated and replaced by equivalent reactions, appears the most generally useful. The methods are applicable to all enzyme mechanisms, including three-substrate and random Bi Bi Ping Pong mechanisms. Solutions are obtained in algebraic form and these are presented for the common random Bi Bi mechanisms. The steady-state quantities of the enzyme intermediates may also be calculated. Additional steps may be introduced into enzyme mechanisms for which the steady-state velocity equation is already known. 2. The calculation of fluxes between substrates and products in three-substrate and random Bi Bi Ping Pong mechanisms is described. 3. It is concluded that the new methods may offer advantages in ease of calculation and in the analysis of the effects of individual steps on the overall reaction. The methods are used to show that an ordered addition of two substrates to an enzyme which is activated by another ligand will not necessarily give hyperbolic steady-state-velocity kinetics or the flux ratios characteristic of an ordered addition, if the dissociation of the ligand from the enzyme is random.
摘要
  1. 本文描述了两种从酶中间体间的通量推导酶反应稳态速度的方法。等效反应技术通过系统地消除酶中间体并用等效反应替代,似乎是最普遍有用的方法。这些方法适用于所有酶机制,包括三底物和随机双底物乒乓机制。以代数形式获得了解,并给出了常见随机双底物机制的解。还可以计算酶中间体的稳态量。对于已经知道稳态速度方程的酶机制,可以引入额外的步骤。2. 描述了三底物和随机双底物乒乓机制中底物与产物间通量的计算。3. 得出的结论是,新方法在计算简便性以及分析各个步骤对整体反应的影响方面可能具有优势。这些方法用于表明,如果配体从酶上的解离是随机的,那么向由另一种配体激活的酶依次添加两种底物不一定会产生双曲线型稳态速度动力学或有序添加所特有的通量比。

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引用本文的文献

1
Isomerization of the free enzyme versus induced fit: effects of steps involving induced fit that bypass enzyme isomerization on flux ratios and countertransport.游离酶的异构化与诱导契合:涉及绕过酶异构化的诱导契合步骤对通量比和逆向转运的影响。
Biochem J. 1997 Jan 1;321 ( Pt 1)(Pt 1):187-99. doi: 10.1042/bj3210187.
2
Flux ratios, induced transport and tracer perturbation.通量比率、诱导转运和示踪剂扰动。
Biochem J. 1994 Sep 15;302 ( Pt 3)(Pt 3):965-6. doi: 10.1042/bj3020965.
3
The mechanism of rabbit muscle phosphofructokinase at pH8.pH8条件下兔肌肉磷酸果糖激酶的作用机制
Biochem J. 1985 Feb 15;226(1):13-28. doi: 10.1042/bj2260013.

本文引用的文献

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PERMEABILITY OF THE HUMAN RED CELL TO LABELLED GLUCOSE.人体红细胞对标记葡萄糖的通透性
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A new method for deriving steady-state rate equations suitable for manual or computer use.一种推导适用于手动或计算机使用的稳态速率方程的新方法。
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