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热力学缓冲的瞬态动力学

Transient kinetics of thermodynamic buffering.

作者信息

Stucki J W, Lehmann L H, Mani P

出版信息

Biophys Chem. 1984 Mar;19(2):131-45. doi: 10.1016/0301-4622(84)85014-0.

DOI:10.1016/0301-4622(84)85014-0
PMID:6326880
Abstract

The transient response of mitochondrial ATP production towards perturbations was studied by analyzing the trajectories leading from arbitrary initial conditions of the adenine nucleotide pool to the final steady state. These trajectories were calculated from differential equations based on linear relations between flows and thermodynamic forces of the adenylate kinase system including oxidative phosphorylation. The motion of the system along the trajectories consists of two phases: (1) a rapid phase leading from initial states to a common relaxation curve; and (2) a slow phase leading along the relaxation curve to the final steady state. The first phase corresponds to a motion close to the loci of constant adenylic energy charge. In line with this observation is the finding that the energy charge is a constant of motion of the adenylate kinase reaction. The second phase corresponds to a motion along a relaxation curve characterized by minimal Lyapunov exponents in the concentration space of the adenine nucleotides. Thus, both phases of the transient kinetics can be approximated in terms of thermodynamic functions to a high degree of precision. Incubations with isolated rat liver mitochondria were in excellent agreement with the theoretical predictions. In summary, these studies show that the adenylate kinase system not only optimizes the efficiency of oxidative phosphorylation through thermodynamic buffering but, in addition, also deeply influences the transient response of the whole system.

摘要

通过分析从腺嘌呤核苷酸池的任意初始条件到最终稳态的轨迹,研究了线粒体ATP产生对扰动的瞬态响应。这些轨迹是根据基于包括氧化磷酸化在内的腺苷酸激酶系统的流量与热力学力之间线性关系的微分方程计算得出的。系统沿轨迹的运动包括两个阶段:(1)从初始状态到共同弛豫曲线的快速阶段;(2)沿弛豫曲线到最终稳态的缓慢阶段。第一阶段对应于接近恒定腺苷酸能量电荷轨迹的运动。与此观察结果一致的是,能量电荷是腺苷酸激酶反应的运动常数。第二阶段对应于沿弛豫曲线的运动,该弛豫曲线在腺嘌呤核苷酸浓度空间中具有最小的李雅普诺夫指数。因此,瞬态动力学的两个阶段都可以在很大程度上用热力学函数近似。用分离的大鼠肝线粒体进行的孵育与理论预测非常吻合。总之,这些研究表明,腺苷酸激酶系统不仅通过热力学缓冲优化氧化磷酸化的效率,而且还深刻影响整个系统的瞬态响应。

相似文献

1
Transient kinetics of thermodynamic buffering.热力学缓冲的瞬态动力学
Biophys Chem. 1984 Mar;19(2):131-45. doi: 10.1016/0301-4622(84)85014-0.
2
The adenylate kinase reaction acts as a frequency filter towards fluctuations of ATP utilization in the cell.腺苷酸激酶反应对细胞中ATP利用的波动起到频率过滤器的作用。
Biophys Chem. 1987 Apr;26(1):19-28. doi: 10.1016/0301-4622(87)80003-0.
3
The thermodynamic-buffer enzymes.热力学缓冲酶
Eur J Biochem. 1980 Aug;109(1):257-67. doi: 10.1111/j.1432-1033.1980.tb04791.x.
4
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Biochim Biophys Acta. 1985 May 31;807(3):245-54. doi: 10.1016/0005-2728(85)90255-5.
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Hexokinase of rat brain mitochondria: relative importance of adenylate kinase and oxidative phosphorylation as sources of substrate ATP, and interaction with intramitochondrial compartments of ATP and ADP.大鼠脑线粒体己糖激酶:腺苷酸激酶和氧化磷酸化作为底物ATP来源的相对重要性,以及与线粒体内ATP和ADP区室的相互作用。
Arch Biochem Biophys. 1991 Apr;286(1):183-94. doi: 10.1016/0003-9861(91)90026-f.
7
Participation of N1-oxide derivatives of adenine nucleotides in the phosphotransferase activity of liver mitochondria.腺嘌呤核苷酸的N1-氧化物衍生物参与肝线粒体的磷酸转移酶活性。
Proc Natl Acad Sci U S A. 1974 Nov;71(11):4630-4. doi: 10.1073/pnas.71.11.4630.
8
Measurement of mitochondrial oxidative phosphorylation: selective inhibition of adenylate kinase activity by P1,P5-di-(adenosine-5')-pentaphosphate.
Anal Biochem. 1979 Jul 1;96(1):7-11. doi: 10.1016/0003-2697(79)90546-3.
9
[Role of adenylate kinase, AMP deaminase and 5'-nucleotidase in the metabolism of adenylic nucleotides].[腺苷酸激酶、AMP脱氨酶和5'-核苷酸酶在腺苷酸代谢中的作用]
Biokhimiia. 1984 Aug;49(8):1248-52.
10
[Adenylate system of rat liver tissue during chemical carcinogenesis].
Ukr Biokhim Zh. 1977 Jan-Feb;49(1):87-90.