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探索信号序列的构象作用:λ受体蛋白野生型和突变信号肽的合成与构象分析

Exploring the conformational roles of signal sequences: synthesis and conformational analysis of lambda receptor protein wild-type and mutant signal peptides.

作者信息

Briggs M S, Gierasch L M

出版信息

Biochemistry. 1984 Jul 3;23(14):3111-4. doi: 10.1021/bi00309a001.

DOI:10.1021/bi00309a001
PMID:6380582
Abstract

Secretion of the Escherichia coli lambda receptor protein (LamB protein) appears from genetic evidence to be correlated with the predicted tendency of its signal sequence to adopt an alpha-helical conformation [Emr, S. D., & Silhavy, T. J. (1983) Proc. Natl. Acad. Sci. U. S. A. 80, 4599]. We have tested this hypothesis by synthesizing major portions of signal sequences from the wild-type and mutant LamB proteins and analyzing their conformations by circular dichroism. The wild-type signal sequence contains a seven-residue hydrophobic region flanked by a proline and a glycine. Chou-Fasman rules predict that this segment will adopt an alpha-helical conformation. An export-deficient mutant is missing four residues from this region; the helix-breaking glycine and proline are thus separated by only three residues, and an alpha helix is not predicted to form. In each of the export-restored revertants, either the glycine or the proline is replaced with a residue which promotes helix formation. The helix content of the synthetic signal sequence fragments on the basis of CD measurements supports the secondary structure hypothesis described above. The relative helicity in aqueous sodium dodecyl sulfate, lysolecithin, or trifluoroethanol is as follows: wild type greater than R2 (Pro----Leu) greater than R1 (Gly----Cys) much greater than deletion mutant.

摘要

从遗传学证据来看,大肠杆菌λ受体蛋白(LamB蛋白)的分泌似乎与其信号序列采用α螺旋构象的预测趋势相关[Emr, S. D., & Silhavy, T. J. (1983) 《美国国家科学院院刊》80, 4599]。我们通过合成野生型和突变型LamB蛋白信号序列的主要部分,并利用圆二色性分析它们的构象,来检验这一假设。野生型信号序列包含一个七残基的疏水区域,两侧分别是一个脯氨酸和一个甘氨酸。Chou-Fasman规则预测该片段将采用α螺旋构象。一个出口缺陷型突变体在该区域缺失了四个残基;因此,破坏螺旋的甘氨酸和脯氨酸仅被三个残基隔开,预计不会形成α螺旋。在每个恢复出口功能的回复突变体中,甘氨酸或脯氨酸被一个促进螺旋形成的残基所取代。基于圆二色性测量的合成信号序列片段的螺旋含量支持上述二级结构假设。在十二烷基硫酸钠水溶液、溶血卵磷脂或三氟乙醇中的相对螺旋度如下:野生型>R2(脯氨酸→亮氨酸)>R1(甘氨酸→半胱氨酸)>>缺失突变体。

相似文献

1
Exploring the conformational roles of signal sequences: synthesis and conformational analysis of lambda receptor protein wild-type and mutant signal peptides.探索信号序列的构象作用:λ受体蛋白野生型和突变信号肽的合成与构象分析
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Conformational and membrane-binding properties of a signal sequence are largely unaltered by its adjacent mature region.信号序列的构象和膜结合特性在很大程度上不会因其相邻的成熟区域而改变。
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引用本文的文献

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The similarity between N-terminal targeting signals for protein import into different organelles and its evolutionary relevance.蛋白质导入不同细胞器的N端靶向信号之间的相似性及其进化相关性。
Front Physiol. 2015 Sep 24;6:259. doi: 10.3389/fphys.2015.00259. eCollection 2015.
2
A career pathway in protein folding: from model peptides to postreductionist protein science.蛋白质折叠的职业途径:从模型肽到后还原主义蛋白质科学。
Protein Sci. 2011 May;20(5):783-90. doi: 10.1002/pro.615. Epub 2011 Apr 4.
3
Use of synthetic signal sequences to explore the protein export machinery.
利用合成信号序列探索蛋白质输出机制。
Biopolymers. 2008;90(3):307-19. doi: 10.1002/bip.20856.
4
Prediction of homology and divergence in the secondary structure of polypeptides.多肽二级结构中同源性与差异性的预测。
Proc Natl Acad Sci U S A. 1985 Jan;82(2):366-70. doi: 10.1073/pnas.82.2.366.
5
Interaction of wild-type signal sequences and their charged variants with model and natural membranes.野生型信号序列及其带电变体与模型膜和天然膜的相互作用。
Biochem J. 1993 Jul 1;293 ( Pt 1)(Pt 1):43-9. doi: 10.1042/bj2930043.
6
Escherichia coli signal peptides direct inefficient secretion of an outer membrane protein (OmpA) and periplasmic proteins (maltose-binding protein, ribose-binding protein, and alkaline phosphatase) in Bacillus subtilis.大肠杆菌信号肽在枯草芽孢杆菌中导致外膜蛋白(OmpA)和周质蛋白(麦芽糖结合蛋白、核糖结合蛋白和碱性磷酸酶)的分泌效率低下。
J Bacteriol. 1994 May;176(10):3013-20. doi: 10.1128/jb.176.10.3013-3020.1994.
7
On the translocation of proteins across membranes.论蛋白质的跨膜转运
Proc Natl Acad Sci U S A. 1987 Feb;84(4):1015-9. doi: 10.1073/pnas.84.4.1015.
8
The role of topogenic sequences in the movement of proteins through membranes.拓扑序列在蛋白质跨膜转运中的作用。
Biochem J. 1987 Sep 1;246(2):249-61. doi: 10.1042/bj2460249.
9
A chemically synthesized pre-sequence of an imported mitochondrial protein can form an amphiphilic helix and perturb natural and artificial phospholipid bilayers.一种化学合成的导入线粒体蛋白的前序列可形成两亲性螺旋,并扰乱天然和人工磷脂双层膜。
EMBO J. 1986 Jun;5(6):1327-34. doi: 10.1002/j.1460-2075.1986.tb04363.x.
10
Effects of inhibitors of membrane signal peptide peptidase on protein translocation into membrane vesicles.
Arch Microbiol. 1989;153(1):90-4. doi: 10.1007/BF00277547.