Mezei M, Mehrotra P K, Beveridge D L
Chemistry Department, Hunter College City University of New York, N.Y. 10021.
J Biomol Struct Dyn. 1984 Aug;2(1):1-27. doi: 10.1080/07391102.1984.10507543.
Monte Carlo computer simulation on a dilute aqueous solution of the glycine zwitterion are reported. The results are presented in terms of the Quasi-Component Distribution Functions (QCDF) of Ben Naim and partitioned into atomic and functional group contributions using the Proximity Criterion. The Proximity Criterion analysis has been extended to orientational properties and a new normalization procedure has been introduced for the radial distribution functions obtained by the Proximity Criterion. The solvation environment of the glycine zwitterion is found to contain, on the average, 14.4 water molecules out of which 3.2 belong to the ammonium group, 6.1 to the methylene group and 5.1 to the carboxyl group. The importance of the many-body statistical mechanical approach to hydration is emphasized by our finding that the configuration corresponding to the absolute minimum of the glycine zwitterion-water potential surface was found to have negligible statistical weight in the aqueous simulation.
报道了对甘氨酸两性离子稀水溶液的蒙特卡罗计算机模拟。结果以本·奈姆的准组分分布函数(QCDF)表示,并使用邻近准则将其划分为原子和官能团贡献。邻近准则分析已扩展到取向性质,并为通过邻近准则获得的径向分布函数引入了一种新的归一化程序。发现甘氨酸两性离子的溶剂化环境平均包含14.4个水分子,其中3.2个属于铵基,6.1个属于亚甲基,5.1个属于羧基。我们的发现强调了多体统计力学方法对水合作用的重要性,即在水模拟中,对应于甘氨酸两性离子-水势面绝对最小值的构型的统计权重可忽略不计。