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人类原α1(I)型胶原蛋白基因结构揭示了内含子和外显子模式的进化保守性。

Human pro alpha 1(I) collagen gene structure reveals evolutionary conservation of a pattern of introns and exons.

作者信息

Chu M L, de Wet W, Bernard M, Ding J F, Morabito M, Myers J, Williams C, Ramirez F

出版信息

Nature. 1984;310(5975):337-40. doi: 10.1038/310337a0.

DOI:10.1038/310337a0
PMID:6462220
Abstract

The collagens represent an interesting example of a structurally related but genetically distinct family of proteins. Type I, the most abundant of the vertebrate collagens, comprises two pro alpha 1(I) chains and one pro alpha 2(I) chain, each containing terminal propeptides and a central domain of 338 (Gly, X, Y) repeats. The structure of the chicken pro alpha 2(I) gene shows an intriguing relationship between exon organization and the arrangement of (Gly, X, Y) repeats (see ref. 2 for review). This has led to the suggestion that the collagens evolved from a common ancestral unit of 54 base pairs (bp). Here we present the structure of the entire human pro alpha 1(I) gene and compare this with the chicken pro alpha 2(I). The exon arrangement of the two genes is remarkably similar, although the human pro alpha 1(I) is more compact because of the shorter length of its introns. The data strongly support the notion that the type I genes have evolved from an ancestral multi-exon unit, and that once the gene was translated, a strong evolutionary pressure caused it to maintain this elaborate structure.

摘要

胶原蛋白是一类结构相关但基因不同的蛋白质家族中的有趣例子。I型胶原蛋白是脊椎动物中最丰富的胶原蛋白,由两条α1(I)前体链和一条α2(I)前体链组成,每条链都包含末端前肽和一个由338个(甘氨酸、X、Y)重复序列组成的中央结构域。鸡α2(I)前体基因的结构显示了外显子组织与(甘氨酸、X、Y)重复序列排列之间的有趣关系(综述见参考文献2)。这导致了一种观点,即胶原蛋白是从一个54个碱基对(bp)的共同祖先单位进化而来的。在这里,我们展示了整个人类α1(I)前体基因的结构,并将其与鸡α2(I)前体基因进行比较。尽管人类α1(I)前体基因由于内含子较短而更加紧凑,但这两个基因的外显子排列非常相似。这些数据有力地支持了I型基因是从一个祖先多外显子单位进化而来的观点,并且一旦该基因被翻译,强大的进化压力使其维持这种精细的结构。

相似文献

1
Human pro alpha 1(I) collagen gene structure reveals evolutionary conservation of a pattern of introns and exons.人类原α1(I)型胶原蛋白基因结构揭示了内含子和外显子模式的进化保守性。
Nature. 1984;310(5975):337-40. doi: 10.1038/310337a0.
2
The human COL11A2 gene structure indicates that the gene has not evolved with the genes for the major fibrillar collagens.人类COL11A2基因结构表明,该基因并非与主要纤维状胶原蛋白的基因一同进化。
J Biol Chem. 1995 Sep 29;270(39):22873-81. doi: 10.1074/jbc.270.39.22873.
3
Complete structural organization of the human alpha 1 (V) collagen gene (COL5A1): divergence from the conserved organization of other characterized fibrillar collagen genes.人类α1(V)胶原蛋白基因(COL5A1)的完整结构组织:与其他已鉴定的纤维状胶原蛋白基因的保守组织存在差异。
Genomics. 1995 Oct 10;29(3):588-97. doi: 10.1006/geno.1995.9961.
4
Structure of the pro alpha 2 (I) collagen gene.原α2(I)型胶原蛋白基因的结构
Nature. 1981 Nov 12;294(5837):129-35. doi: 10.1038/294129a0.
5
Structure of a full-length cDNA clone for the prepro alpha 2(I) chain of human type I procollagen. Comparison with the chicken gene confirms unusual patterns of gene conservation.人I型前胶原α2(I)链前体全长cDNA克隆的结构。与鸡基因的比较证实了基因保守性的异常模式。
Biochem J. 1988 Jun 15;252(3):633-40. doi: 10.1042/bj2520633.
6
Organization of the exons coding for pro alpha 1(II) collagen N-propeptide confirms a distinct evolutionary history of this domain of the fibrillar collagen genes.编码原α1(II)型胶原蛋白N端前肽的外显子组织证实了纤维状胶原蛋白基因这一结构域独特的进化史。
Genomics. 1989 Apr;4(3):438-41. doi: 10.1016/0888-7543(89)90353-4.
7
Evolution of collagen IV genes from a 54-base pair exon: a role for introns in gene evolution.IV型胶原蛋白基因从一个54碱基对外显子的进化:内含子在基因进化中的作用
J Mol Evol. 1990 Jun;30(6):479-88. doi: 10.1007/BF02101102.
8
Fine structural analysis of the chicken pro alpha 2 collagen gene.鸡原α2胶原蛋白基因的精细结构分析
Proc Natl Acad Sci U S A. 1981 Feb;78(2):712-6. doi: 10.1073/pnas.78.2.712.
9
Large introns in the 3' end of the gene for the pro alpha 1 (IV) chain of human basement membrane collagen.人基底膜胶原蛋白原α1(IV)链基因3'端的大内含子。
Proc Natl Acad Sci U S A. 1986 Mar;83(6):1568-72. doi: 10.1073/pnas.83.6.1568.
10
Evolution of chick type I procollagen genes.鸡I型前胶原基因的进化
J Mol Evol. 1985;22(3):209-19. doi: 10.1007/BF02099750.

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J Clin Invest. 1985 Aug;76(2):604-11. doi: 10.1172/JCI112012.
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Nucleic Acids Res. 1985 May 24;13(10):3427-38. doi: 10.1093/nar/13.10.3427.
8
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J Mol Evol. 1985;22(3):209-19. doi: 10.1007/BF02099750.
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