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非洲爪蟾苯丙氨酸转运核糖核酸的核苷酸序列。

The nucleotide sequence of phenylalanine tRNA of Xenopus laevis.

作者信息

Mazabraud A

出版信息

Biochimie. 1982 Oct;64(10):955-60. doi: 10.1016/s0300-9084(82)80359-3.

DOI:10.1016/s0300-9084(82)80359-3
PMID:6817827
Abstract

The nucleotide sequence of Xenopus laevis phenylalanine tRNA extracted from oocytes was determined to be: pGCCGAAAUAm2GCUCm1AG DDGGGAGAGCm22 G psi psi AGACmUGmAAYA psi C UAAAGm7GDCm5CCUGGT psi CGm1AUCCCGG GUUUCGGCACCAoH. This result was achieved by analysing, with classical procedures [6], the oligonucleotides obtained after digestion by T1 or pancreatic ribonuclease. This sequence is identical to the mammalian sequence. It has been entirely conserved during 10(8) years, the time lapse between the divergence of amphibians and mammals in evolution. In contrast to 5S RNA, no important heterogeneity has been found in the oocyte sequence, suggesting that there is only a single sequence for tRNAphe in X. laevis. Small differences are seen in the elution pattern from RPC-5 columns for immature oocyte and somatic tRNAphe. They are probably due to a submodification of methyl-5-cytidine residues, which appear to be about half methylated in tRNAphe as well as in total tRNA from immature oocytes.

摘要

从非洲爪蟾卵母细胞中提取的苯丙氨酸tRNA的核苷酸序列测定结果如下:pGCCGAAAUAm2GCUCm1AG DDGGGAGAGCm22 G ψ ψ AGACmUGmAAYA ψ C UAAAGm7GDCm5CCUGGT ψ CGm1AUCCCGG GUUUCGGCACCAoH。该结果是通过采用经典方法[6]分析经T1或胰核糖核酸酶消化后得到的寡核苷酸而获得的。此序列与哺乳动物的序列相同。在两栖动物和哺乳动物在进化中分化后的10^8年时间里,该序列完全保守。与5S RNA不同,在卵母细胞序列中未发现重要的异质性,这表明非洲爪蟾的苯丙氨酸tRNA只有单一序列。未成熟卵母细胞的苯丙氨酸tRNA和体细胞的苯丙氨酸tRNA在RPC - 5柱上的洗脱模式存在微小差异。它们可能是由于5 - 甲基胞嘧啶残基的亚修饰所致,在苯丙氨酸tRNA以及未成熟卵母细胞的总tRNA中,这些残基似乎约有一半被甲基化。

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The nucleotide sequence of phenylalanine tRNA of Xenopus laevis.非洲爪蟾苯丙氨酸转运核糖核酸的核苷酸序列。
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2
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The nucleotide sequence of Euglena cytoplasmic phenylalanine transfer RNA. Evidence for possible classifications of Euglena among the animal rather than the plant kingdom.眼虫细胞质苯丙氨酸转移核糖核酸的核苷酸序列。关于眼虫可能应归类于动物界而非植物界的证据。
Nucleic Acids Res. 1981 Jul 10;9(13):3199-204. doi: 10.1093/nar/9.13.3199.

引用本文的文献

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Pleiotropic effects of intron removal on base modification pattern of yeast tRNAPhe: an in vitro study.内含子去除对酵母苯丙氨酸转运RNA碱基修饰模式的多效性影响:一项体外研究
Nucleic Acids Res. 1997 Jul 15;25(14):2694-701. doi: 10.1093/nar/25.14.2694.
2
Enzymatic conversion of guanosine 3' adjacent to the anticodon of yeast tRNAPhe to N1-methylguanosine and the wye nucleoside: dependence on the anticodon sequence.酵母苯丙氨酸tRNA反密码子相邻的3'位鸟苷向N1-甲基鸟苷和y核苷的酶促转化:取决于反密码子序列。
EMBO J. 1987 Feb;6(2):477-83. doi: 10.1002/j.1460-2075.1987.tb04778.x.
3
Enzymatic 2'-O-methylation of the wobble nucleoside of eukaryotic tRNAPhe: specificity depends on structural elements outside the anticodon loop.
EMBO J. 1986 May;5(5):1105-9. doi: 10.1002/j.1460-2075.1986.tb04329.x.
4
Compilation of tRNA sequences and sequences of tRNA genes.tRNA序列及tRNA基因序列的汇编。
Nucleic Acids Res. 1991 Apr 25;19 Suppl(Suppl):2127-71. doi: 10.1093/nar/19.suppl.2127.