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合成多核苷酸聚[d(AT)].聚[d(AT)]双螺旋定向纤维中的构象转变。

Conformational transitions in oriented fibres of the synthetic polynucleotide poly[d(AT)].poly[d(AT)] double helix.

作者信息

Mahendrasingam A, Rhodes N J, Goodwin D C, Nave C, Pigram W J, Fuller W, Brahms J, Vergne J

出版信息

Nature. 1983 Feb 10;301(5900):535-7. doi: 10.1038/301535a0.

DOI:10.1038/301535a0
PMID:6823334
Abstract

The synthetic polynucleotide poly[d(AT)].poly[d(AT)] is of interest in studies of the relationship between nucleic acid structure and function. In particular, A + T-rich regions in DNA double helices have been invoked as centres for controlling the transcription of genetic information. Here we describe conditions for observing by X-ray fibre diffraction the A, B, C and D conformations of Na-poly[d(AT)].poly[d(AT)], and for inducing transitions between these conformations. The D form emerges as a particularly stable conformation; once assumed, it persists over a wide range of variation in the relative humidity of the fibre environment. Further, while transitions between the B and D conformations are readily reversible, transitions between A and D are much more complex.

摘要

合成多核苷酸聚[d(AT)]·聚[d(AT)]在核酸结构与功能关系的研究中备受关注。特别是,DNA双螺旋中富含A+T的区域已被认为是控制遗传信息转录的中心。在此,我们描述了通过X射线纤维衍射观察钠-聚[d(AT)]·聚[d(AT)]的A、B、C和D构象以及诱导这些构象之间转变的条件。D构象表现为一种特别稳定的构象;一旦形成,它在纤维环境相对湿度的广泛变化范围内持续存在。此外,虽然B和D构象之间的转变很容易逆转,但A和D之间的转变则要复杂得多。

相似文献

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Conformational transitions in oriented fibres of the synthetic polynucleotide poly[d(AT)].poly[d(AT)] double helix.合成多核苷酸聚[d(AT)].聚[d(AT)]双螺旋定向纤维中的构象转变。
Nature. 1983 Feb 10;301(5900):535-7. doi: 10.1038/301535a0.
2
Conformational transitions in the synthetic polynucleotide poly[d(G-C)] . poly[d(G-C)] double-helix.合成多核苷酸聚[d(G-C)]·聚[d(G-C)]双螺旋中的构象转变。
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A new D-DNA form of poly(dA-dT).poly(dA-dT): an A-DNA type structure with reversed Hoogsteen pairing.聚(dA-dT)·聚(dA-dT)的一种新型D-DNA形式:具有反向Hoogsteen配对的A-DNA型结构。
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The structure of poly(dA).poly(dT) as revealed by an X-ray fibre diffraction.X射线纤维衍射揭示的聚(dA)·聚(dT)结构。
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Conformational transitions and hydration of poly d(A-T).poly d(A-T) in fibers.纤维中聚d(A-T)·聚d(A-T)的构象转变与水合作用
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Helix-helix transitions in DNA: fibre X-ray study of the particular cases poly(dG-dC). poly(dG-dC) and poly(dA). 2poly(dT).DNA中的螺旋-螺旋转变:聚(dG-dC)·聚(dG-dC)和聚(dA)·2聚(dT)特定案例的纤维X射线研究
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Structure of the alpha-form of poly[d(A)].poly[d(T)] and related polynucleotide duplexes.
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Thermal melting of poly(dA-dT).poly(dA-dT) in methanol-water solutions.聚(dA-dT)·聚(dA-dT)在甲醇-水溶液中的热变性
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Conformational isomerizations of the poly(dA-dT) and poly(amino2dA-dT) duplexes involving the unusual X-DNA double helix: a fourth derivative spectrophotometric study.涉及异常X-DNA双螺旋的聚(dA-dT)和聚(氨基2dA-dT)双链体的构象异构化:四阶导数分光光度法研究
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The molecular electrostatic potential and steric accessibility of poly (dA-dT). poly (dA-dT) in various conformations: B-DNA, D-DNA and 'alternating-B' DNA.聚(dA-dT)·聚(dA-dT)在不同构象(B-DNA、D-DNA和“交替B”DNA)下的分子静电势和空间可及性。
Nucleic Acids Res. 1981 Dec 11;9(23):6539-52. doi: 10.1093/nar/9.23.6539.

引用本文的文献

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Structure of D-DNA: 8-fold or 7-fold helix?D-DNA的结构:八重螺旋还是七重螺旋?
EMBO J. 1983;2(9):1557-60. doi: 10.1002/j.1460-2075.1983.tb01623.x.
2
Proton NMR studies on the covalently linked RNA-DNA hybrid r(GCG)d(TATACGC). Assignment of proton resonances by application of the nuclear Overhauser effect.关于共价连接的RNA-DNA杂交体r(GCG)d(TATACGC)的质子核磁共振研究。通过应用核Overhauser效应确定质子共振峰。
Nucleic Acids Res. 1983 Aug 25;11(16):5717-38. doi: 10.1093/nar/11.16.5717.
3
Interaction of transition metal ions with Z form poly d(A-C).poly d(G-T) and poly d(A-T) studied by I.R. spectroscopy.
通过红外光谱研究过渡金属离子与Z型聚d(A-C).聚d(G-T)和聚d(A-T)的相互作用。
Nucleic Acids Res. 1986 Apr 25;14(8):3501-13. doi: 10.1093/nar/14.8.3501.
4
Solvent interactions stabilising nucleic acid conformers.稳定核酸构象异构体的溶剂相互作用。
Nucleic Acids Res. 1989 Jan 11;17(1):389-404. doi: 10.1093/nar/17.1.389.
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Conformational transitions and hydration of poly d(A-T).poly d(A-T) in fibers.纤维中聚d(A-T)·聚d(A-T)的构象转变与水合作用
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Sequence effects on local DNA topology.序列对局部DNA拓扑结构的影响。
Proc Natl Acad Sci U S A. 1991 Oct 15;88(20):9087-91. doi: 10.1073/pnas.88.20.9087.