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动态蛋白质结构:牛心肌红蛋白一氧化碳结合位点处四个离散的快速相互转化构象体的红外证据。

Dynamic protein structures: infrared evidence for four discrete rapidly interconverting conformers at the carbon monoxide binding site of bovine heart myoglobin.

作者信息

Caughey W S, Shimada H, Choc M G, Tucker M P

出版信息

Proc Natl Acad Sci U S A. 1981 May;78(5):2903-7. doi: 10.1073/pnas.78.5.2903.

Abstract

Infrared spectra for the carbon monoxide complex with myoglobin isolated as the oxygenyl species from bovine heart muscle were carefully examined in the C--O stretch region as either the pH or the temperature was varied. Deconvolutions of these spectra into bands of Gaussian shape suggest the presence of four bands near 1938(I), 1944(II), 1954(III), and 1965(IV) cm-1 with halfband widths of about 18, 9, 9, and 10 cm-1, respectively. The relative intensities of the four bands varied with changes in pH or temperature. 13C NMR spectra and other evidence indicate that the four C--O stretch bands arise from four discrete rapidly interconverting conformers: CI, CII, CIII, and CIV. Under conditions of physiological pH and temperature, the relative stabilities are CI approximately CII much greater than CIII approximately CIV. The delta H and delta S values for conformer interconversions are estimated to range from -8 to 34 kJ/mol and -27 to 87 J.mol-1 K-1, respectively; therefore the structures of the conformers may be expected to vary significantly. These findings provide evidence for a highly flexible, dynamic structure at the ligand-binding site of bovine myoglobin, even when ligands are bound.

摘要

当pH值或温度发生变化时,对从牛心肌中分离出来的作为氧合物种的一氧化碳与肌红蛋白的复合物在C-O伸缩区域的红外光谱进行了仔细研究。将这些光谱解卷积为高斯形状的谱带表明,在1938(I)、1944(II)、1954(III)和1965(IV)cm-1附近存在四个谱带,其半高宽分别约为18、9、9和10 cm-1。这四个谱带的相对强度随pH值或温度的变化而变化。13C NMR光谱和其他证据表明,这四个C-O伸缩谱带来自四个离散的快速相互转化的构象异构体:CI、CII、CIII和CIV。在生理pH值和温度条件下,相对稳定性为CI≈CII远大于CIII≈CIV。构象异构体相互转化的ΔH和ΔS值估计分别在-8至34 kJ/mol和-27至87 J·mol-1·K-1范围内;因此,可以预期构象异构体的结构会有显著变化。这些发现为牛肌红蛋白配体结合位点处高度灵活的动态结构提供了证据,即使在配体结合时也是如此。

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