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由大肠杆菌DNA聚合酶III全酶的两个亚组件连续合成的产物的大小类别。

Size classes of products synthesized processively by two subassemblies of Escherichia coli DNA polymerase III holoenzyme.

作者信息

Fay P J, Johanson K O, McHenry C S, Bambara R A

出版信息

J Biol Chem. 1982 May 25;257(10):5692-9.

PMID:7040370
Abstract

Two forms of Escherichia coli DNA polymerase III, DNA polymerase III', and DNA polymerase III have been shown to synthesize DNA products via a processive mechanism with product sizes distinctive for each enzyme form. These forms of DNA polymerase III are intermediate in complexity between the core DNA polymerase III and the DNA polymerase III holoenzyme. In a previous publication (Fay, P. J., Johanson K. O., McHenry, C. S., and Bambara, R. A. (1981) J. Biol. Chem. 256, 976-983), we demonstrated that on a randomly primed fd DNA template or on an oligo(dT)10 . poly(dA) template, the DNA polymerase III holoenzyme adds more than 100 nucleotides before dissociation, whereas the core enzyme adds 10 to 15 nucleotides. Now we show that DNA polymerase III' adds 30 to 40 nucleotides before dissociation. This number can be increased to approximately 60 if spermidine is present, but it is insensitive to the presence of E. coli single-stranded DNA-binding protein. DNA polymerase III adds about 50 nucleotides before dissociation, but this value can be increased to 200 nucleotides in the presence of the binding protein. Using measurement of product sizes made on an oligo(dT)10 . poly(dA) template, reconstitution of holoenzyme activity from DNA polymerase III and the beta subunit was monitored. Finally, it is shown that the products obtained from a purified initiation complex of holoenzyme and oligo(dT)10 . poly(dA) derive solely from the holoenzyme.

摘要

已证明大肠杆菌DNA聚合酶III的两种形式,即DNA聚合酶III'和DNA聚合酶III,通过一种持续性机制合成DNA产物,每种酶形式的产物大小都不同。这些DNA聚合酶III的形式在复杂性上介于核心DNA聚合酶III和DNA聚合酶III全酶之间。在之前的一篇出版物中(费伊,P.J.,约翰森,K.O.,麦克亨利,C.S.,和班巴拉,R.A.(1981年)《生物化学杂志》256卷,976 - 983页),我们证明在随机引物的fd DNA模板或oligo(dT)10·聚(dA)模板上,DNA聚合酶III全酶在解离前添加超过100个核苷酸,而核心酶添加10到15个核苷酸。现在我们表明DNA聚合酶III'在解离前添加30到40个核苷酸。如果存在亚精胺,这个数字可以增加到大约60,但它对大肠杆菌单链DNA结合蛋白的存在不敏感。DNA聚合酶III在解离前添加约50个核苷酸,但在结合蛋白存在的情况下,这个值可以增加到200个核苷酸。使用在oligo(dT)10·聚(dA)模板上进行的产物大小测量,监测了从DNA聚合酶III和β亚基重构全酶活性的过程。最后,结果表明从全酶和oligo(dT)10·聚(dA)的纯化起始复合物获得的产物仅来自全酶。

相似文献

1
Size classes of products synthesized processively by two subassemblies of Escherichia coli DNA polymerase III holoenzyme.由大肠杆菌DNA聚合酶III全酶的两个亚组件连续合成的产物的大小类别。
J Biol Chem. 1982 May 25;257(10):5692-9.
2
Properties of initiation complexes formed between Escherichia coli DNA polymerase III holoenzyme and primed DNA in the absence of ATP.大肠杆菌DNA聚合酶III全酶与引发型DNA在无ATP情况下形成的起始复合物的性质
J Biol Chem. 1987 Feb 15;262(5):2121-30.
3
Excess beta subunit can bypass the ATP requirement for highly processive synthesis by the Escherichia coli DNA polymerase III holoenzyme.过量的β亚基可以绕过大肠杆菌DNA聚合酶III全酶进行高度连续合成所需的ATP。
J Biol Chem. 1983 Sep 25;258(18):11344-9.
4
Purification and characterization of DNA polymerase III'. Identification of tau as a subunit of the DNA polymerase III holoenzyme.DNA聚合酶III的纯化与特性鉴定。鉴定tau为DNA聚合酶III全酶的一个亚基。
J Biol Chem. 1982 Mar 10;257(5):2657-63.
5
Size classes of products synthesized processively by DNA polymerase III and DNA polymerase III holoenzyme of Escherichia coli.由大肠杆菌的DNA聚合酶III和DNA聚合酶III全酶连续合成的产物的大小类别。
J Biol Chem. 1981 Jan 25;256(2):976-83.
6
The beta subunit of the Escherichia coli DNA polymerase III holoenzyme interacts functionally with the catalytic core in the absence of other subunits.在没有其他亚基的情况下,大肠杆菌DNA聚合酶III全酶的β亚基与催化核心在功能上相互作用。
J Biol Chem. 1986 Jun 5;261(16):7550-7.
7
DNA replication by novel macromolecular complexes involving DNA polymerase III holoenzyme activity.由涉及DNA聚合酶III全酶活性的新型大分子复合物进行的DNA复制。
Biochem Biophys Res Commun. 1983 Apr 15;112(1):80-7. doi: 10.1016/0006-291x(83)91800-4.
8
DNA Polymerase III holoenzyme of Escherichia coli. IV. The holoenzyme is an asymmetric dimer with twin active sites.大肠杆菌的DNA聚合酶III全酶。IV. 全酶是具有双活性位点的不对称二聚体。
J Biol Chem. 1988 May 15;263(14):6570-8.
9
The beta subunit modulates bypass and termination at UV lesions during in vitro replication with DNA polymerase III holoenzyme of Escherichia coli.在使用大肠杆菌DNA聚合酶III全酶进行体外复制期间,β亚基调节紫外线损伤处的旁路和终止。
J Biol Chem. 1989 Jul 5;264(19):11275-81.
10
ATP activation of DNA polymerase III holoenzyme from Escherichia coli. II. Initiation complex: stoichiometry and reactivity.大肠杆菌DNA聚合酶III全酶的ATP激活作用。II. 起始复合物:化学计量和反应活性。
J Biol Chem. 1982 Oct 10;257(19):11474-8.

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2
Purification and interactions of the MucA' and MucB proteins constituting the DNA polymerase RI.构成DNA聚合酶RI的MucA'和MucB蛋白的纯化及相互作用。
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Mechanism of opening a sliding clamp.滑动夹钳打开的机制。
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The interplay of primer-template DNA phosphorylation status and single-stranded DNA binding proteins in directing clamp loaders to the appropriate polarity of DNA.引物-模板DNA磷酸化状态与单链DNA结合蛋白在引导钳式装载器至DNA适当极性方面的相互作用。
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Multiple C-terminal tails within a single E. coli SSB homotetramer coordinate DNA replication and repair.单个大肠杆菌 SSB 同源四聚体中的多个 C 末端尾部协调 DNA 复制和修复。
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Parallel multiplicative target screening against divergent bacterial replicases: identification of specific inhibitors with broad spectrum potential.针对不同细菌复制酶的并行乘法靶标筛选:具有广谱潜力的特异性抑制剂的鉴定。
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Uracil recognition by replicative DNA polymerases is limited to the archaea, not occurring with bacteria and eukarya.复制性DNA聚合酶对尿嘧啶的识别仅限于古细菌,在细菌和真核生物中不会发生。
Nucleic Acids Res. 2008 Feb;36(3):705-11. doi: 10.1093/nar/gkm1023. Epub 2007 Nov 21.
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Devoted to the lagging strand-the subunit of DNA polymerase III holoenzyme contacts SSB to promote processive elongation and sliding clamp assembly.专门针对滞后链——DNA聚合酶III全酶的亚基与单链结合蛋白(SSB)接触,以促进持续延伸和滑动夹组装。
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