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嗜热四膜虫胞质起始tRNA的核苷酸序列。

Nucleotide sequence of cytoplasmic initiator tRNA from Tetrahymena thermophila.

作者信息

Kuchino Y, Mita T, Nishimura S

出版信息

Nucleic Acids Res. 1981 Sep 25;9(18):4557-62. doi: 10.1093/nar/9.18.4557.

DOI:10.1093/nar/9.18.4557
PMID:7301582
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC327458/
Abstract

The total primary structure of cytoplasmic initiator tRNA from Tetrahymena thermophila mating type IV, was determined by post labeling techniques. The sequence is pa-G-C-A-G-G-G-U-m1G-G-C-G-A-A-A-D-Gm-G-A-A-U-C-G-C-G-U-Psi-G-G-G-C-U-C-A-U-t6A -A-C-Psi-C-A-A-A-A-m7G-U-m5C-A-G-A-G-G-A-Psi-C-G-m1A-A-A-C-C-U-C-U-C-U-C-U-G-C- U-A-C-C-AOH. The nucleotide residue in the position next to the 5'-end of the anticodon of this tRNA (residue No. 33) is uridine instead of cytidine, which has been found in cytoplasmic initiator tRNAs from multicellular eukaryotic organisms. The sequence of three consecutive G-C base pairs in the anticodon stem common to all other cytoplasmic initiator tRNAs is disrupted in this tRNA; namely, the cytidine at residue 40 in this region is replaced by pseudouridine in Tetrahymena initiator tRNA.

摘要

嗜热四膜虫IV型交配型细胞质起始tRNA的完整一级结构是通过后标记技术确定的。其序列为pa-G-C-A-G-G-G-U-m1G-G-C-G-A-A-A-D-Gm-G-A-A-U-C-G-C-G-U-Psi-G-G-G-C-U-C-A-U-t6A -A-C-Psi-C-A-A-A-A-m7G-U-m5C-A-G-A-G-G-A-Psi-C-G-m1A-A-A-C-C-U-C-U-C-U-C-U-G-C- U-A-C-C-AOH。该tRNA反密码子5'端相邻位置的核苷酸残基(第33号残基)是尿苷,而非胞苷,在多细胞真核生物的细胞质起始tRNA中发现的是胞苷。该tRNA中所有其他细胞质起始tRNA共有的反密码子茎中的三个连续G-C碱基对序列被破坏;即,该区域第40号残基处的胞苷在嗜热四膜虫起始tRNA中被假尿苷取代。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4d4/327458/0338b2cac0e7/nar00411-0126-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4d4/327458/63214d902abf/nar00411-0125-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4d4/327458/0338b2cac0e7/nar00411-0126-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4d4/327458/63214d902abf/nar00411-0125-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b4d4/327458/0338b2cac0e7/nar00411-0126-a.jpg

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本文引用的文献

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Compilation of tRNA sequences.转运RNA序列的汇编。
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2
Primary structure of AUA-specific isoleucine transfer ribonucleic acid from Escherichia coli.来自大肠杆菌的AUA特异性异亮氨酸转移核糖核酸的一级结构。
Biochemistry. 1980 May 13;19(10):2085-9. doi: 10.1021/bi00551a013.
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A different approach to RNA sequencing.一种不同的RNA测序方法。
枯草芽孢杆菌168的赖氨酸转运RNA:结构分析
Nucleic Acids Res. 1982 May 25;10(10):3125-32. doi: 10.1093/nar/10.10.3125.
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Comparison of initiation of protein synthesis in procaryotes, eucaryotes, and organelles.原核生物、真核生物和细胞器中蛋白质合成起始的比较。
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Nucleic Acids Res. 1987 Jan 12;15(1):141-60. doi: 10.1093/nar/15.1.141.
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Tetrahymena thermophila glutamine tRNA and its gene that corresponds to UAA termination codon.嗜热四膜虫谷氨酰胺tRNA及其对应UAA终止密码子的基因。
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Nature. 1978 Jul 6;274(5666):87-9. doi: 10.1038/274087a0.
4
Initiator tRNAs have a unique anticodon loop conformation.起始tRNA具有独特的反密码子环构象。
Proc Natl Acad Sci U S A. 1979 Jul;76(7):3289-93. doi: 10.1073/pnas.76.7.3289.
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6
Direct chemical method for sequencing RNA.RNA测序的直接化学方法。
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