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组蛋白折叠:一种用于DNA压缩和蛋白质二聚化的普遍存在的结构基序。

The histone fold: a ubiquitous architectural motif utilized in DNA compaction and protein dimerization.

作者信息

Arents G, Moudrianakis E N

机构信息

Department of Biology, Johns Hopkins University, Baltimore, MD 21218, USA.

出版信息

Proc Natl Acad Sci U S A. 1995 Nov 21;92(24):11170-4. doi: 10.1073/pnas.92.24.11170.

DOI:10.1073/pnas.92.24.11170
PMID:7479959
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC40593/
Abstract

The histones of all eukaryotes show only a low degree of primary structure homology, but our earlier crystallographic results defined a three-dimensional structural motif, the histone fold, common to all core histones. We now examine the specific architectural patterns within the fold and analyze the nature of the amino acid residues within its functional segments. The histone fold emerges as a fundamental protein dimerization motif while the differentiations of the tips of the histone dimers appear to provide the rules of core octamer assembly and the basis for nucleosome regulation. We present evidence for the occurrence of the fold from archaebacteria to mammals and propose the use of this structural motif to define a distinct family of proteins, the histone fold superfamily. It appears that evolution has conserved the conformation of the fold even through variations in primary structure and among proteins with various functional roles.

摘要

所有真核生物的组蛋白仅显示出较低程度的一级结构同源性,但我们早期的晶体学研究结果确定了一种三维结构基序——组蛋白折叠,它是所有核心组蛋白共有的。我们现在研究该折叠结构内的特定结构模式,并分析其功能片段内氨基酸残基的性质。组蛋白折叠成为一种基本的蛋白质二聚化基序,而组蛋白二聚体末端的差异似乎为核心八聚体组装规则和核小体调控奠定了基础。我们提供了从古细菌到哺乳动物存在该折叠结构的证据,并建议利用这种结构基序来定义一个独特的蛋白质家族——组蛋白折叠超家族。即使在一级结构存在差异以及具有各种功能作用的蛋白质之间,进化似乎也保留了该折叠结构的构象。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8292/40593/cb356d3a89a0/pnas01502-0364-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8292/40593/ba2b29c15d68/pnas01502-0362-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8292/40593/9620c9343220/pnas01502-0363-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8292/40593/dc9e69338319/pnas01502-0364-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8292/40593/cb356d3a89a0/pnas01502-0364-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8292/40593/ba2b29c15d68/pnas01502-0362-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8292/40593/9620c9343220/pnas01502-0363-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8292/40593/dc9e69338319/pnas01502-0364-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8292/40593/cb356d3a89a0/pnas01502-0364-b.jpg

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Nature. 1993 Mar 18;362(6417):219-23. doi: 10.1038/362219a0.
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Proc Natl Acad Sci U S A. 1993 Nov 15;90(22):10489-93. doi: 10.1073/pnas.90.22.10489.
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Human CENP-A contains a histone H3 related histone fold domain that is required for targeting to the centromere.
组蛋白尾部剪辑和乙酰化在 RNA 聚合酶 II 介导的核小体转录中的作用。
Nucleic Acids Res. 2023 Oct 27;51(19):10364-10374. doi: 10.1093/nar/gkad754.
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Studies of the Mechanism of Nucleosome Dynamics: A Review on Multifactorial Regulation from Computational and Experimental Cases.核小体动力学机制研究:基于计算与实验案例的多因素调控综述
Polymers (Basel). 2023 Apr 1;15(7):1763. doi: 10.3390/polym15071763.
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The Hypersaline Archaeal Histones HpyA and HstA Are DNA Binding Proteins That Defy Categorization According to Commonly Used Functional Criteria.高盐古菌组蛋白 HpyA 和 HstA 是 DNA 结合蛋白,根据常用的功能标准,它们难以归类。
mBio. 2023 Apr 25;14(2):e0344922. doi: 10.1128/mbio.03449-22. Epub 2023 Feb 13.
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Human FoxP Transcription Factors as Tractable Models of the Evolution and Functional Outcomes of Three-Dimensional Domain Swapping.人类 FoxP 转录因子作为三维结构域交换进化和功能结果的可处理模型。
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Deciphering the Enigma of the Histone H2A.Z-1/H2A.Z-2 Isoforms: Novel Insights and Remaining Questions.解析组蛋白 H2A.Z-1/H2A.Z-2 异构体之谜:新的见解和遗留问题。
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人类着丝粒蛋白A包含一个与组蛋白H3相关的组蛋白折叠结构域,该结构域是靶向着丝粒所必需的。
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