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[枯草芽孢杆菌土壤菌株中隐蔽质粒p1414微型复制子片段的核苷酸序列测定及比较分析]

[Determination and comparative analysis of the nucleotide sequence for minireplicon fragments of the cryptic plasmid p1414 from the soil strain of Bacillus subtilis].

作者信息

Kanapina A Sh, Kanapin A A, Prozorov A A

出版信息

Genetika. 1995 Sep;31(9):1201-9.

PMID:7489884
Abstract

Nucleotide sequences of two minireplicon fragments of the p1414 cryptic plasmid of Bacillus subtilis were determined. The fragments corresponded to the region containing ori(+) and the gene coding for Rep protein. Comparing sequences of the fragments with corresponding sequences of other ss+ plasmids suggested that ori(+) of p1414 belongs to the family of endogenous cryptic B. subtilis plasmids, which form an individual, closely related subgroup in the group of ori(+) sequences of the pC194 type. It was found that the amino acid sequence of a conservative FLTLTV motif located, together with its flanking sequences, at the N ends of Rep proteins encoded by different ss+ plasmids, is similar to those of several transmembrane proteins and signal peptides. These results, together with computer data on predicting the secondary and tertiary structure of the N-terminal domain of the p1414 Rep protein, suggest that the domain can serve as a "membrane anchor" during plasmid replication.

摘要

测定了枯草芽孢杆菌p1414隐蔽质粒两个微型复制子片段的核苷酸序列。这些片段对应于含有ori(+)和编码Rep蛋白的基因的区域。将这些片段的序列与其他ss+质粒的相应序列进行比较表明,p1414的ori(+)属于枯草芽孢杆菌内源性隐蔽质粒家族,该家族在pC194型ori(+)序列组中形成一个单独的、密切相关的亚组。研究发现,位于不同ss+质粒编码的Rep蛋白N端的保守FLTLTV基序及其侧翼序列的氨基酸序列,与几种跨膜蛋白和信号肽的氨基酸序列相似。这些结果,连同关于预测p1414 Rep蛋白N端结构域二级和三级结构的计算机数据,表明该结构域在质粒复制过程中可作为“膜锚”。

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