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体内产生的反义DNA对基因的调控。

Gene regulation by antisense DNA produced in vivo.

作者信息

Mao J R, Shimada M, Inouye S, Inouye M

机构信息

Department of Biochemistry, Robert Wood Johnson Medical School, Piscataway, New Jersey 08854, USA.

出版信息

J Biol Chem. 1995 Aug 25;270(34):19684-7. doi: 10.1074/jbc.270.34.19684.

DOI:10.1074/jbc.270.34.19684
PMID:7544343
Abstract

Antisense technology has been widely used for regulating gene expression. Single-stranded RNA or DNA complementary to a target mRNA can inhibit the translation of the mRNA. Antisense RNA is produced in vivo, while antisense DNA is chemically synthesized as an oligonucleotide, which is extracellularly added to the cells. To maintain the effect of antisense DNA, a synthetic oligonucleotide has to be constantly added to the system. An advantage of antisense DNA over antisense RNA is that the target mRNA hybridized with the antisense DNA can be specifically digested by ribonuclease H. Here, we attempted to produce in vivo short single-stranded DNAs complementary to a specific mRNA. We demonstrate that such antisense oligodeoxyribonucleotide of a desired sequence can be produced in Escherichia coli using a retron, a bacterial retroelement, as a vector and that the antisense DNA thus produced in vivo can effectively inhibit the expression of a specific E. coli gene, such as the gene for the major outer membrane lipoprotein.

摘要

反义技术已被广泛用于调控基因表达。与靶标mRNA互补的单链RNA或DNA可抑制该mRNA的翻译。反义RNA在体内产生,而反义DNA则作为寡核苷酸进行化学合成,并在细胞外添加到细胞中。为维持反义DNA的作用,必须不断向系统中添加合成寡核苷酸。反义DNA相对于反义RNA的一个优势在于,与反义DNA杂交的靶标mRNA可被核糖核酸酶H特异性消化。在此,我们尝试在体内产生与特定mRNA互补的短单链DNA。我们证明,利用逆转录子(一种细菌反转录元件)作为载体,可在大肠杆菌中产生所需序列的此类反义寡脱氧核糖核苷酸,且在体内如此产生的反义DNA可有效抑制特定大肠杆菌基因的表达,如主要外膜脂蛋白基因。

相似文献

1
Gene regulation by antisense DNA produced in vivo.体内产生的反义DNA对基因的调控。
J Biol Chem. 1995 Aug 25;270(34):19684-7. doi: 10.1074/jbc.270.34.19684.
2
Degradation of FinP antisense RNA from F-like plasmids: the RNA-binding protein, FinO, protects FinP from ribonuclease E.F 类质粒中 FinP 反义 RNA 的降解:RNA 结合蛋白 FinO 保护 FinP 免受核糖核酸酶 E 的作用。
J Mol Biol. 1999 Jan 29;285(4):1457-73. doi: 10.1006/jmbi.1998.2404.
3
In vivo production of oligodeoxyribonucleotides of specific sequences: application to antisense DNA.
Ciba Found Symp. 1997;209:224-33; discussion 233-4. doi: 10.1002/9780470515396.ch17.
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Artificial antisense RNAs silence lacZ in E. coli by decreasing target mRNA concentration.人工反义RNA通过降低靶mRNA浓度使大肠杆菌中的lacZ基因沉默。
BMB Rep. 2008 Aug 31;41(8):568-74. doi: 10.5483/bmbrep.2008.41.8.568.
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Probing the sequence and structure of in vitro synthesized antisense and target RNAs from the replication control system of plasmid pMV158.探测来自质粒 pMV158 复制控制系统的体外合成反义 RNA 和靶 RNA 的序列和结构。
Plasmid. 2013 Jul;70(1):94-103. doi: 10.1016/j.plasmid.2013.02.005. Epub 2013 Mar 26.
6
Antisense RNA and DNA in Escherichia coli.
Methods Enzymol. 2000;313:467-85. doi: 10.1016/s0076-6879(00)13030-7.
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Messenger ribonucleic acid for the lipoprotein of the Escherichia coli outer membrane is polyadenylated.大肠杆菌外膜脂蛋白的信使核糖核酸是聚腺苷酸化的。
J Mol Biol. 1987 Feb 5;193(3):507-15. doi: 10.1016/0022-2836(87)90263-4.
8
Retron-Ec107 is inserted into the Escherichia coli genome by replacing a palindromic 34bp intergenic sequence.逆转录酶Ec107通过取代一段34bp的回文基因间序列插入到大肠杆菌基因组中。
Mol Microbiol. 1992 Feb;6(3):345-54. doi: 10.1111/j.1365-2958.1992.tb01477.x.
9
Mechanism of post-segregational killing by the hok/sok system of plasmid R1. Sok antisense RNA regulates hok gene expression indirectly through the overlapping mok gene.质粒R1的hok/sok系统的分离后杀伤机制。Sok反义RNA通过重叠的mok基因间接调节hok基因的表达。
J Mol Biol. 1992 Jan 5;223(1):41-54. doi: 10.1016/0022-2836(92)90714-u.
10
Secondary structures of Escherichia coli antisense micF RNA, the 5'-end of the target ompF mRNA, and the RNA/RNA duplex.大肠杆菌反义micF RNA的二级结构、靶标ompF mRNA的5'端以及RNA/RNA双链体。
Biochemistry. 1995 Mar 21;34(11):3621-31. doi: 10.1021/bi00011a017.

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