Richard J P, Westerfeld J G, Lin S
Department of Chemistry, University at Buffalo, SUNY 14260-3000, USA.
Biochemistry. 1995 Sep 19;34(37):11703-12. doi: 10.1021/bi00037a007.
Seven substituted alkyl beta-D-galactopyranosides 1-OR have been prepared and shown to be fair to excellent substrates for hydrolysis catalyzed by beta-galactosidase (Escherichia coli, lac Z). Brønsted parameters of (beta 1g)k3 = -0.49 +/- 0.13 and (beta 1g)kcat/Km = -0.75 +/- 0.14, respectively, were determined at pH 8.6 for k3 (s-1), the first-order rate constant for cleavage of enzyme-bound 1-OR, and kcat/Km (M-1 s-1), the second-order rate constant for reaction of the free enzyme and 1-OR. There is a weak correlation between log Km and the pKa of the alkyl alcohol leaving group, which is attributed to stabilization of the Michaelis complex by hydrophobic interactions between the enzyme and electron-withdrawing halogen substituents at the alkoxy leaving group. These binding interactions are probably both productive and expressed in the value of kcat/Km and nonproductive and expressed in the value of k3. The negative values of beta 1g are inconsistent with enzymatic catalysis of endocyclic cleavage of the glycosidic bond. The values of beta 1g for enzyme-catalyzed cleavage of alkyl beta-D-galactopyranosides lie between those observed for the spontaneous (beta 1g approximately -1.25) and specific-acid-catalyzed (beta 1g approximately 0) cleavage of acetals, and these pathways are therefore excluded for the enzyme-catalyzed reaction. Removal of the metal cofactor Mg2+ from the enzyme causes a approximately 0.2 unit decrease in (beta 1g)k3 for beta-galactosidase-catalyzed cleavage of 1-OR. The interpretation of this change in beta 1g is unclear. The Brønsted coefficients for the beta-galactosidase-catalyzed reaction are consistent with participation by an essential catalytic residue in concerted general-acid catalysis of cleavage of the glycosidic bond of 1-OR and/or stabilization of developing negative charge at the alkoxy oxygen by interaction with the magnesium ion cofactor.
已制备出七种取代烷基β-D-吡喃半乳糖苷1-OR,并证明它们是β-半乳糖苷酶(大肠杆菌,乳糖Z)催化水解的中等至优良底物。在pH 8.6下,分别测定了(k3的)Brønsted参数(β1g)k3 = -0.49 ± 0.13和(kcat/Km的) (β1g)kcat/Km = -0.75 ± 0.14,其中k3 (s-1)是酶结合的1-OR裂解的一级速率常数,kcat/Km (M-1 s-1)是游离酶与1-OR反应的二级速率常数。log Km与烷基醇离去基团的pKa之间存在弱相关性,这归因于酶与烷氧基离去基团上吸电子卤素取代基之间的疏水相互作用对米氏复合物的稳定作用。这些结合相互作用可能既有生产性的,体现在kcat/Km值中,也有非生产性的,体现在k3值中。β1g的负值与糖苷键内环裂解的酶促催化不一致。酶催化烷基β-D-吡喃半乳糖苷裂解的β1g值介于缩醛自发裂解(β1g约为-1.25)和特定酸催化裂解(β1g约为0)所观察到的值之间,因此这些途径被排除在酶催化反应之外。从酶中去除金属辅因子Mg2+会导致β-半乳糖苷酶催化1-OR裂解的(β1g)k3下降约0.2个单位。β1g这种变化的解释尚不清楚。β-半乳糖苷酶催化反应的Brønsted系数与一个必需催化残基参与协同一般酸催化1-OR糖苷键裂解和/或通过与镁离子辅因子相互作用稳定烷氧基氧上发展的负电荷是一致的。