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胎儿弯曲杆菌胎儿亚种ATCC 27374的基因组图谱。

Genome map of Campylobacter fetus subsp. fetus ATCC 27374.

作者信息

Salama S M, Newnham E, Chang N, Taylor D E

机构信息

Department of Medical Microbiology and Immunology, University of Alberta, Edmonton, Canada.

出版信息

FEMS Microbiol Lett. 1995 Oct 15;132(3):239-45. doi: 10.1016/0378-1097(95)00316-w.

Abstract

A physical map of the chromosome of Campylobacter fetus subsp. fetus was constructed by using pulsed-field gel electrophoresis of restriction fragments generated by SalI, SmaI and NotI. Digestion of the type strain ATCC 27374 with these restriction endonucleases resulted in generating 4-14 fragments. The order of the fragments was deduced from hybridization of these restriction fragments to Southern blots of pulsed-field gel electrophoresis gels generated by the other two enzymes. The estimated genome size was 1160 kb. The position of several homologous and heterologous genes was determined on the circular map. These included the 2.8-kb sapA gene, encoding the 97-kDa surface array protein. Three copies of ribosomal RNA genes for which the 16S, 23S and 5S rRNA appeared to be located in close proximity in each of the three regions. The RNA polymerase genes rpoA, rpoB, and rpoD were mapped and appeared to be situated close together in one region. The flagellin genes (flaAB) of C. jejuni and the gyrase genes gyrA and gyrB of C. perfringens and Bacillus subtilis, respectively, were used to identify the locations of flaAB, the gyrA and the gyrB genes on the ATCC 27374 chromosome.

摘要

利用由SalI、SmaI和NotI产生的限制性片段进行脉冲场凝胶电泳,构建了胎儿弯曲菌胎儿亚种染色体的物理图谱。用这些限制性内切酶对模式菌株ATCC 27374进行消化,产生了4 - 14个片段。这些片段的顺序是通过将这些限制性片段与由其他两种酶产生的脉冲场凝胶电泳凝胶的Southern印迹杂交推导出来的。估计基因组大小为1160 kb。在环状图谱上确定了几个同源和异源基因的位置。这些基因包括编码97 kDa表面阵列蛋白的2.8 kb sapA基因。核糖体RNA基因的三个拷贝,其中16S、23S和5S rRNA在三个区域中的每一个区域似乎都紧密相邻。对RNA聚合酶基因rpoA、rpoB和rpoD进行了定位,它们似乎位于一个区域且彼此靠近。分别用空肠弯曲菌的鞭毛蛋白基因(flaAB)以及产气荚膜梭菌和枯草芽孢杆菌的gyrase基因gyrA和gyrB来确定flaAB、gyrA和gyrB基因在ATCC 27374染色体上的位置。

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