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操纵子tcb、tfd和clc编码马来酰乙酸还原酶(改良邻位途径的第四种酶)的证据。

Evidence that operons tcb, tfd, and clc encode maleylacetate reductase, the fourth enzyme of the modified ortho pathway.

作者信息

Kasberg T, Daubaras D L, Chakrabarty A M, Kinzelt D, Reineke W

机构信息

Bergische Universität-Gesamthochschule Wuppertal, Germany.

出版信息

J Bacteriol. 1995 Jul;177(13):3885-9. doi: 10.1128/jb.177.13.3885-3889.1995.

Abstract

The maleylacetate reductase from Pseudomonas sp. strain B13 functioning in the modified ortho pathway was purified and digested with trypsin. The polypeptides separated by high-performance liquid chromatography were sequenced. Alignments with the polypeptides predicted from the tfdF and tcbF genes located on plasmids pJP4 of the 2,4-dichlorophenoxyacetate-degrading Alcaligenes eutrophus JMP134 and pP51 of the 1,2,4-trichlorobenzene-degrading Pseudomonas sp. strain P51 as well as polypeptides predicted from the tftE gene located on the chromosome of the 2,4,5-trichlorophenoxyacetate-degrading Burkholderia cepacia AC1100 were obtained. In addition, the deduced protein sequence encoded by the nucleotide sequence downstream of clcD on plasmid pAC27 of the 3-chlorobenzoate-degrading Pseudomonas putida AC866 was tested for homology. Significant sequence similarities with the polypeptides encoded by the tfdF, tcbF, and tftE genes as well as the nucleotide sequence downstream of the clcD gene gave evidence that these genes might encode maleylacetate reductases. A NAD-binding motif in a beta alpha beta-element was detected.

摘要

对在改良邻位途径中发挥作用的来自假单胞菌属菌株B13的马来酰乙酸还原酶进行了纯化,并用胰蛋白酶消化。对通过高效液相色谱分离的多肽进行了测序。获得了与从降解2,4-二氯苯氧基乙酸的真养产碱菌JMP134的质粒pJP4上的tfdF和tcbF基因以及降解1,2,4-三氯苯的假单胞菌属菌株P51的质粒pP51上预测的多肽的比对结果,以及与从降解2,4,5-三氯苯氧基乙酸的洋葱伯克霍尔德菌AC1100染色体上的tftE基因预测的多肽的比对结果。此外,还对3-氯苯甲酸降解菌恶臭假单胞菌AC866的质粒pAC27上clcD下游核苷酸序列编码的推导蛋白质序列进行了同源性测试。与tfdF、tcbF和tftE基因编码的多肽以及clcD基因下游核苷酸序列的显著序列相似性表明,这些基因可能编码马来酰乙酸还原酶。在一个β-α-β元件中检测到一个NAD结合基序。

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