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人类胆碱乙酰转移酶基因:可变首个外显子的定位

Human choline acetyltransferase gene: localization of alternative first exons.

作者信息

Chireux M A, Le Van Thai A, Weber M J

机构信息

Laboratoire de Biologie Moléculaire Eucaryote, Centre National de la Recherche Scientifique, Toulouse, France.

出版信息

J Neurosci Res. 1995 Mar 1;40(4):427-38. doi: 10.1002/jnr.490400402.

DOI:10.1002/jnr.490400402
PMID:7616604
Abstract

Two overlapping cosmids containing the 5' end of human choline acetyltransferase (ChAT) gene have been cloned. Using heterologous probes, we localized two alternative first exons homologous to rodent ChAT exons R and M (Misawa et al.: J Biol Chem 267:20392-20399, 1992). The sequence of rodent exon N was not conserved in the human gene. Northern blot analysis of mRNA purified from the human neuroepithelioma cell lines LA-N2 and MC-I-XC revealed that both exons R and M were transcribed in mRNA species of 6.0 and 2.5 kb. Only the 6-kb species was detected with both R- and M-specific probes in the neuroepithelioma cell line CHP126. Reverse transcription-polymerase chain reaction (RT-PCR) analysis suggested that the major mRNA species in MC-I-XC and CHP126 cells contained the proximal part of exon M spliced to exon 1, which contains the alternative ACG initiation codon. RT-PCR also allowed the characterization of a mRNA species containing exon R spliced to exon 1, but no species containing both exon R and the distal part of exon M could be detected. RT-PCR was also used to evidence an alternative exon (tentatively numbered exon 8) in the coding sequence.

摘要

已克隆出两个包含人胆碱乙酰转移酶(ChAT)基因5'端的重叠黏粒。利用异源探针,我们定位了与啮齿动物ChAT外显子R和M同源的两个选择性第一外显子(三泽等人:《生物化学杂志》267:20392 - 20399,1992年)。啮齿动物外显子N的序列在人类基因中未保守存在。对从人神经上皮瘤细胞系LA - N2和MC - I - XC纯化的mRNA进行Northern印迹分析显示,外显子R和M均转录于6.0 kb和2.5 kb的mRNA种类中。在神经上皮瘤细胞系CHP126中,用R特异性和M特异性探针均仅检测到6 kb的种类。逆转录 - 聚合酶链反应(RT - PCR)分析表明,MC - I - XC和CHP126细胞中的主要mRNA种类包含与外显子1剪接的外显子M的近端部分,外显子1含有选择性ACG起始密码子。RT - PCR还能够鉴定出一种包含与外显子1剪接的外显子R的mRNA种类,但未检测到同时包含外显子R和外显子M远端部分的种类。RT - PCR还用于证明编码序列中的一个选择性外显子(暂编号为外显子8)。

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引用本文的文献

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Chaperone-Mediated Regulation of Choline Acetyltransferase Protein Stability and Activity by HSC/HSP70, HSP90, and p97/VCP.伴侣介导的HSC/HSP70、HSP90和p97/VCP对胆碱乙酰转移酶蛋白稳定性和活性的调节
Front Mol Neurosci. 2017 Dec 12;10:415. doi: 10.3389/fnmol.2017.00415. eCollection 2017.
2
Association of Choline Acetyltransferase Gene Polymorphisms (SNPs rs868750G/A, rs1880676G/A, rs2177369G/A and rs3810950G/A) with Alzheimer's Disease Risk: A Meta-Analysis.胆碱乙酰转移酶基因多态性(单核苷酸多态性rs868750G/A、rs1880676G/A、rs2177369G/A和rs3810950G/A)与阿尔茨海默病风险的关联:一项荟萃分析。
PLoS One. 2016 Jul 8;11(7):e0159022. doi: 10.1371/journal.pone.0159022. eCollection 2016.
3
Nuclear choline acetyltransferase activates transcription of a high-affinity choline transporter.
核胆碱乙酰转移酶激活高亲和力胆碱转运体的转录。
J Biol Chem. 2011 Feb 18;286(7):5836-45. doi: 10.1074/jbc.M110.147611. Epub 2010 Dec 16.
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Sequence variation in the CHAT locus shows no association with late-onset Alzheimer's disease.CHAT基因座的序列变异与晚发性阿尔茨海默病无关联。
Hum Genet. 2003 Aug;113(3):258-67. doi: 10.1007/s00439-003-0960-2. Epub 2003 May 21.
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Choline acetyltransferase mutations cause myasthenic syndrome associated with episodic apnea in humans.胆碱乙酰转移酶突变会导致人类出现与发作性呼吸暂停相关的肌无力综合征。
Proc Natl Acad Sci U S A. 2001 Feb 13;98(4):2017-22. doi: 10.1073/pnas.98.4.2017.