• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

The affinity of pyridoxal 5'-phosphate for folding intermediates of Escherichia coli serine hydroxymethyltransferase.

作者信息

Cai K, Schirch D, Schirch V

机构信息

Department of Biochemistry and Molecular Biophysics, Virginia Commonwealth University, Richmond 23298, USA.

出版信息

J Biol Chem. 1995 Aug 18;270(33):19294-9. doi: 10.1074/jbc.270.33.19294.

DOI:10.1074/jbc.270.33.19294
PMID:7642604
Abstract

Escherichia coli serine hydroxymethyltransferase is a 94-kDa homodimer. Each subunit contains a covalently attached pyridoxal-P, which is required for catalytic activity. At which step pyridoxal-P binds in the folding pathway of E. coli serine hydroxymethyltransferase is addressed in this study. E. coli serine hydroxymethyl-transferase is rapidly unfolded to an apparent random coil in 8 M urea. Removal of the urea initiates a complete refolding to the native holoenzyme in less than 10 min at 30 degrees C. Several intermediates on the folding pathway have been identified. The most important information was obtained during folding studies at 4 degrees C. At this temperature, the far-UV circular dichroism spectrum and the fluorescence spectrum of the 3 tryptophan residues become characteristic of the native apoenzyme in less than 10 min. Size exclusion chromatography shows that under these conditions the refolding enzyme is a mixture of monomeric and dimeric species. Continued incubation at 4 degrees C for 60 min results in the formation of only a dimeric species. Neither the monomer nor dimer formed at 4 degrees C bind pyridoxal phosphate. Raising the temperature to 30 degrees C results in the formation of a dimeric enzyme which rapidly binds pyridoxal phosphate forming active enzyme. These studies support the interpretation that pyridoxal phosphate binds only at the end of the folding pathway to dimeric apoenzyme and plays no significant role in the folding mechanism.

摘要

相似文献

1
The affinity of pyridoxal 5'-phosphate for folding intermediates of Escherichia coli serine hydroxymethyltransferase.
J Biol Chem. 1995 Aug 18;270(33):19294-9. doi: 10.1074/jbc.270.33.19294.
2
Structural studies on folding intermediates of serine hydroxymethyltransferase using fluorescence resonance energy transfer.利用荧光共振能量转移对丝氨酸羟甲基转移酶折叠中间体的结构研究。
J Biol Chem. 1996 Nov 1;271(44):27311-20. doi: 10.1074/jbc.271.44.27311.
3
The mechanism of addition of pyridoxal 5'-phosphate to Escherichia coli apo-serine hydroxymethyltransferase.5'-磷酸吡哆醛与大肠杆菌脱辅基丝氨酸羟甲基转移酶的加成机制。
Biochem J. 2007 Jun 15;404(3):477-85. doi: 10.1042/BJ20061681.
4
Interaction of sheep liver apo-serine hydroxymethyltransferase with pyridoxal-5'-phosphate: a physicochemical, kinetic, and thermodynamic study.绵羊肝脏脱辅基丝氨酸羟甲基转移酶与磷酸吡哆醛的相互作用:物理化学、动力学及热力学研究
Arch Biochem Biophys. 1996 Jun 15;330(2):363-72. doi: 10.1006/abbi.1996.0263.
5
Crystal structure at 2.4 A resolution of E. coli serine hydroxymethyltransferase in complex with glycine substrate and 5-formyl tetrahydrofolate.分辨率为2.4埃的大肠杆菌丝氨酸羟甲基转移酶与甘氨酸底物及5-甲酰四氢叶酸复合物的晶体结构。
J Mol Biol. 2000 Feb 11;296(1):155-68. doi: 10.1006/jmbi.1999.3453.
6
Reversible unfolding of sheep liver tetrameric serine hydroxymethyltransferase.绵羊肝脏四聚体丝氨酸羟甲基转移酶的可逆去折叠
Biochim Biophys Acta. 1998 Apr 23;1384(1):141-52. doi: 10.1016/s0167-4838(98)00013-2.
7
Structural stability of the cofactor binding site in Escherichia coli serine hydroxymethyltransferase--the role of evolutionarily conserved hydrophobic contacts.大肠杆菌丝氨酸羟甲基转移酶辅助因子结合位点的结构稳定性——保守的疏水接触在进化中的作用。
FEBS J. 2009 Dec;276(24):7319-28. doi: 10.1111/j.1742-4658.2009.07442.x.
8
Structural studies on folding intermediates of serine hydroxymethyltransferase using single tryptophan mutants.利用单色氨酸突变体对丝氨酸羟甲基转移酶折叠中间体的结构研究。
J Biol Chem. 1996 Feb 9;271(6):2987-94. doi: 10.1074/jbc.271.6.2987.
9
Folding pathway of the pyridoxal 5'-phosphate C-S lyase MalY from Escherichia coli.来自大肠杆菌的磷酸吡哆醛C-S裂解酶MalY的折叠途径。
Biochem J. 2005 Aug 1;389(Pt 3):885-98. doi: 10.1042/BJ20050279.
10
Conformational transitions driven by pyridoxal-5'-phosphate uptake in the psychrophilic serine hydroxymethyltransferase from Psychromonas ingrahamii.由英格拉姆嗜冷单胞菌的嗜冷丝氨酸羟甲基转移酶中磷酸吡哆醛摄取驱动的构象转变。
Proteins. 2014 Oct;82(10):2831-41. doi: 10.1002/prot.24646. Epub 2014 Aug 5.

引用本文的文献

1
Contribution of Second-Shell Residues to PLP-Dependent Transaminase Catalysis: A Case Study of D-Amino Acid Transaminase from .第二壳层残基对依赖磷酸吡哆醛的转氨酶催化作用的贡献:来自[具体来源]的D-氨基酸转氨酶的案例研究
Int J Mol Sci. 2025 Sep 2;26(17):8536. doi: 10.3390/ijms26178536.
2
Structural insights into binding of polyglutamylated tetrahydrofolate by serine hydroxymethyltransferase 8 from soybean.大豆丝氨酸羟甲基转移酶8对聚谷氨酸化四氢叶酸结合的结构见解。
Front Plant Sci. 2024 Aug 19;15:1451839. doi: 10.3389/fpls.2024.1451839. eCollection 2024.
3
Insight into the Conformational Transitions of Serine Acetyl Transferase Isoforms in : Implications for Structural and Functional Balance.
丝氨酸乙酰转移酶同工型构象转变的深入研究:对结构与功能平衡的启示
ACS Omega. 2022 Jul 7;7(28):24626-24637. doi: 10.1021/acsomega.2c02467. eCollection 2022 Jul 19.
4
Insight into the dimer dissociation process of the Chromobacterium violaceum (S)-selective amine transaminase.洞察紫色杆菌(S)选择性胺转氨酶的二聚体解离过程。
Sci Rep. 2019 Nov 18;9(1):16946. doi: 10.1038/s41598-019-53177-3.
5
Structural and functional insight into serine hydroxymethyltransferase from Helicobacter pylori.幽门螺杆菌丝氨酸羟甲基转移酶的结构与功能研究
PLoS One. 2018 Dec 14;13(12):e0208850. doi: 10.1371/journal.pone.0208850. eCollection 2018.
6
Determinants of Thermostability in Serine Hydroxymethyltransferase Identified by Principal Component Analysis.主成分分析鉴定丝氨酸羟甲基转移酶热稳定性的决定因素。
Sci Rep. 2017 Apr 19;7:46463. doi: 10.1038/srep46463.
7
Engineering a pyridoxal 5'-phosphate supply for cadaverine production by using Escherichia coli whole-cell biocatalysis.利用大肠杆菌全细胞生物催化构建用于尸胺生产的磷酸吡哆醛供应体系。
Sci Rep. 2015 Oct 22;5:15630. doi: 10.1038/srep15630.
8
Extremophilic SHMTs: from structure to biotechnology.极端嗜热 SHMT 酶:从结构到生物技术。
Biomed Res Int. 2013;2013:851428. doi: 10.1155/2013/851428. Epub 2013 Jun 13.
9
Serine hydroxymethyltransferase from the cold adapted microorganism Psychromonas ingrahamii: a low temperature active enzyme with broad substrate specificity.来自低温适应微生物英格拉姆嗜冷单胞菌的丝氨酸羟甲基转移酶:一种具有广泛底物特异性的低温活性酶。
Int J Mol Sci. 2012;13(2):1314-1326. doi: 10.3390/ijms13021314. Epub 2012 Jan 25.
10
Biophysical characterization of Entamoeba histolytica phosphoserine aminotransferase (EhPSAT): role of cofactor and domains in stability and subunit assembly.溶组织内阿米巴磷酸丝氨酸转氨酶的生物物理特性研究:辅助因子和结构域在稳定性和亚基组装中的作用。
Eur Biophys J. 2011 May;40(5):599-610. doi: 10.1007/s00249-010-0654-3. Epub 2010 Dec 16.