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Does very short patch (VSP) repair efficiency vary in relation to gene expression levels?

作者信息

Eyre-Walker A

出版信息

J Mol Evol. 1995 Jun;40(6):705-6. doi: 10.1007/BF00160520.

DOI:10.1007/BF00160520
PMID:7643420
Abstract
摘要

相似文献

1
Does very short patch (VSP) repair efficiency vary in relation to gene expression levels?
J Mol Evol. 1995 Jun;40(6):705-6. doi: 10.1007/BF00160520.
2
Compositional heterogeneity of the Escherichia coli genome: a role for VSP repair?大肠杆菌基因组的组成异质性:VSP修复的作用?
J Mol Evol. 1994 Oct;39(4):340-6. doi: 10.1007/BF00160266.
3
DNA mismatch repair and synonymous codon evolution in mammals.哺乳动物中的DNA错配修复与同义密码子进化
Mol Biol Evol. 1994 Jan;11(1):88-98. doi: 10.1093/oxfordjournals.molbev.a040095.
4
DNA mismatch correction by Very Short Patch repair may have altered the abundance of oligonucleotides in the E. coli genome.通过极短补丁修复进行的DNA错配校正可能改变了大肠杆菌基因组中寡核苷酸的丰度。
Nucleic Acids Res. 1992 Apr 11;20(7):1663-8. doi: 10.1093/nar/20.7.1663.
5
Interaction of MutS and Vsr: some dominant-negative mutS mutations that disable methyladenine-directed mismatch repair are active in very-short-patch repair.MutS与Vsr的相互作用:一些使甲基腺嘌呤定向错配修复失活的显性负性mutS突变在极短片段修复中具有活性。
J Bacteriol. 2001 Nov;183(21):6487-90. doi: 10.1128/JB.183.21.6487-6490.2001.
6
Genetic requirements for hyper-recombination by very short patch mismatch repair: involvement of Escherichia coli DNA polymerase I.
Mol Gen Genet. 1989 Jun;217(2-3):254-6. doi: 10.1007/BF02464889.
7
Cooperation and competition in mismatch repair: very short-patch repair and methyl-directed mismatch repair in Escherichia coli.错配修复中的合作与竞争:大肠杆菌中的极短补丁修复和甲基导向错配修复
Mol Microbiol. 2002 Jun;44(6):1421-8. doi: 10.1046/j.1365-2958.2002.02989.x.
8
Statistical evaluation and biological interpretation of non-random abundance in the E. coli K-12 genome of tetra- and pentanucleotide sequences related to VSP DNA mismatch repair.对大肠杆菌K-12基因组中与VSP DNA错配修复相关的四核苷酸和五核苷酸序列的非随机丰度进行统计评估和生物学解释。
Nucleic Acids Res. 1992 Apr 11;20(7):1657-62. doi: 10.1093/nar/20.7.1657.
9
A gene required for very short patch repair in Escherichia coli is adjacent to the DNA cytosine methylase gene.大肠杆菌中极短片段修复所需的一个基因与DNA胞嘧啶甲基化酶基因相邻。
J Bacteriol. 1990 Aug;172(8):4214-21. doi: 10.1128/jb.172.8.4214-4221.1990.
10
Very short patch repair of T:G mismatches in vivo: importance of context and accessory proteins.体内T:G错配的极短片段修复:背景和辅助蛋白的重要性
J Bacteriol. 1995 Feb;177(3):660-6. doi: 10.1128/jb.177.3.660-666.1995.

引用本文的文献

1
Codon bias in Escherichia coli: the influence of codon context on mutation and selection.大肠杆菌中的密码子偏好性:密码子上下文对突变和选择的影响。
Nucleic Acids Res. 1997 Apr 1;25(7):1397-404. doi: 10.1093/nar/25.7.1397.
2
A possible relationship between VSP mismatch repair and gene expression level.VSP错配修复与基因表达水平之间的一种可能关系。
J Mol Evol. 1996 Aug;43(2):161-3. doi: 10.1007/BF02337361.

本文引用的文献

1
Compositional heterogeneity of the Escherichia coli genome: a role for VSP repair?大肠杆菌基因组的组成异质性:VSP修复的作用?
J Mol Evol. 1994 Oct;39(4):340-6. doi: 10.1007/BF00160266.
2
Transcription and nucleotide excision repair--reflections, considerations and recent biochemical insights.
Mutat Res. 1994 May 1;307(1):5-14. doi: 10.1016/0027-5107(94)90272-0.
3
Codon usage in bacteria: correlation with gene expressivity.细菌中的密码子使用:与基因表达能力的相关性
Nucleic Acids Res. 1982 Nov 25;10(22):7055-74. doi: 10.1093/nar/10.22.7055.
4
Codon usage and tRNA content in unicellular and multicellular organisms.单细胞和多细胞生物体中的密码子使用情况和tRNA含量。
Mol Biol Evol. 1985 Jan;2(1):13-34. doi: 10.1093/oxfordjournals.molbev.a040335.
5
The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications.密码子适应指数——一种定向同义密码子使用偏好性的度量方法及其潜在应用。
Nucleic Acids Res. 1987 Feb 11;15(3):1281-95. doi: 10.1093/nar/15.3.1281.