Smolen P
Mathematical Research Branch, NIDDK, NIH, Bethesda, MD 20892, USA.
J Theor Biol. 1995 May 21;174(2):137-48. doi: 10.1006/jtbi.1995.0087.
Existing models for glycolytic oscillations are not based on detailed experimental kinetics of the glycolytic enzymes. Here, a model is constructed to fit the kinetics of skeletal muscle phosphofructokinase with respect to variations in AMP, ATP, fructose-6-P, and fructose 1,6-P2 levels. A Monod-Wyman-Changeux model for a tetrameric enzyme is considered. However, it is found that the kinetic data fit considerably better with an assumption of identical, independent subunits. With parameters that fit these data and with a previous model for the rest of glycolysis, product activation of phosphofructokinase leads to oscillations of glycolytic intermediates and [ATP] resembling those observed experimentally in muscle extracts. The period is several minutes. The model can also produce oscillations at neutral pH and with [ATP] representative of an intact cell. Under both conditions the mean concentrations and oscillations vary with the rate of glucose phosphorylation in a plausible manner only if some amount of glucose-6-phosphatase or glucose-6-P dehydrogenase activity is assumed or if hexokinase is inhibited by glucose-6-P. Also, the model can be reduced to two variables for ease of analysis and the oscillation mechanism thereby illustrated.
现有的糖酵解振荡模型并非基于糖酵解酶详细的实验动力学。在此,构建了一个模型,以拟合骨骼肌磷酸果糖激酶相对于AMP、ATP、6-磷酸果糖和1,6-二磷酸果糖水平变化的动力学。考虑了一个针对四聚体酶的莫诺德-怀曼-尚热模型。然而,发现假设亚基相同且独立时,动力学数据拟合得更好。利用拟合这些数据的参数以及先前关于糖酵解其余部分的模型,磷酸果糖激酶的产物激活导致糖酵解中间产物和[ATP]的振荡,类似于在肌肉提取物中实验观察到的情况。周期为几分钟。该模型还可以在中性pH值以及具有代表完整细胞的[ATP]条件下产生振荡。在这两种情况下,只有假设存在一定量的6-磷酸葡萄糖磷酸酶或6-磷酸葡萄糖脱氢酶活性,或者己糖激酶被6-磷酸葡萄糖抑制时,平均浓度和振荡才会以合理的方式随葡萄糖磷酸化速率变化。此外,为便于分析,该模型可简化为两个变量,从而阐明振荡机制。