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探索详细单神经元模型中的参数空间:嗅球的二尖瓣细胞和颗粒细胞模拟

Exploring parameter space in detailed single neuron models: simulations of the mitral and granule cells of the olfactory bulb.

作者信息

Bhalla U S, Bower J M

机构信息

Division of Biology, California Institute of Technology, Pasadena 91125.

出版信息

J Neurophysiol. 1993 Jun;69(6):1948-65. doi: 10.1152/jn.1993.69.6.1948.

DOI:10.1152/jn.1993.69.6.1948
PMID:7688798
Abstract
  1. Detailed compartmental computer simulations of single mitral and granule cells of the vertebrate olfactory bulb were constructed using previously published geometric data. Electrophysiological properties were determined by comparing model output to previously published experimental data, mainly current-clamp recordings. 2. The passive electrical properties of each model were explored by comparing model output with intracellular potential data from hyperpolarizing current injection experiments. The results suggest that membrane resistivity in both cells is nonuniform, with somatas having a substantially lower resistivity than the dendrites. 3. The active properties of these cells were explored by incorporating active ion channels into modeled compartments. On the basis of evidence from the literature, the mitral cell model included six channel types: fast sodium, fast delayed rectifier (Kfast), slow delayed rectifier (K), transient outward potassium current (KA), voltage- and calcium-dependent potassium current (KCa), and L-type calcium current. The granule cell model included four channel types: rat brain sodium, K, KA, and the non-inactivating muscarinic potassium current (KM). Modeled channels were based on the Hodgkin-Huxley formalism. 4. Representative kinetics for each of the channel classes above were obtained from the literature. The experimentally unknown spatial distributions of each included channel were obtained by systematic parameter searches. These were conducted in two ways: large-scale simulation series, in which each parameter was varied in turn, and an adaptation of a multidimensional conjugate gradient method. In each case, the simulated results were compared wtih experimental data using a curve-matching function evaluating mean squared differences of several aspects of the simulated and experimental voltage waveforms. 5. Systematic parameter variations revealed a single distinct region of parameter space in which the mitral cell model best fit the data. This region of parameter space was also very robust to parameter variations. Specifically, optimum performance was obtained when calcium and slow K channels were concentrated in the glomeruli, with a lower density in the soma and proximal secondary dendrites. The distribution of sodium and fast potassium channels, on the other hand, was highest at the soma and axon, with a much lighter distribution throughout the secondary dendrites. The KA and KCa channels were also concentrated near the soma. 6. The parameter search of the granule cell model was much less restrained by experimental data. Several parameter regimes were found that gave a good match to the data.(ABSTRACT TRUNCATED AT 400 WORDS)
摘要
  1. 利用先前发表的几何数据,构建了脊椎动物嗅球单个二尖瓣细胞和颗粒细胞的详细分区计算机模拟。通过将模型输出与先前发表的实验数据(主要是电流钳记录)进行比较,确定了电生理特性。2. 通过将模型输出与超极化电流注入实验的细胞内电位数据进行比较,探索了每个模型的被动电特性。结果表明,两种细胞的膜电阻率都不均匀,胞体的电阻率明显低于树突。3. 通过将活性离子通道纳入建模分区来探索这些细胞的活性特性。根据文献证据,二尖瓣细胞模型包括六种通道类型:快速钠通道、快速延迟整流钾通道(Kfast)、慢速延迟整流钾通道(K)、瞬时外向钾电流(KA)、电压和钙依赖性钾电流(KCa)以及L型钙电流。颗粒细胞模型包括四种通道类型:大鼠脑钠通道、K通道、KA通道和非失活毒蕈碱钾电流(KM)。建模通道基于霍奇金 - 赫胥黎形式。4. 上述每种通道类别的代表性动力学是从文献中获得的。每种包含的通道的实验未知空间分布是通过系统的参数搜索获得的。这些搜索通过两种方式进行:大规模模拟系列,其中每个参数依次变化;以及多维共轭梯度方法的一种改编。在每种情况下,使用评估模拟和实验电压波形几个方面的均方差异的曲线匹配函数,将模拟结果与实验数据进行比较。5. 系统的参数变化揭示了参数空间中的一个独特区域,在该区域中二尖瓣细胞模型与数据最佳拟合。该参数空间区域对参数变化也非常稳健。具体而言,当钙通道和慢速钾通道集中在肾小球中,在胞体和近端二级树突中的密度较低时,可获得最佳性能。另一方面,钠通道和快速钾通道在胞体和轴突处分布最高,在整个二级树突中的分布要轻得多。KA通道和KCa通道也集中在胞体附近。6. 颗粒细胞模型的参数搜索受实验数据的限制要少得多。发现了几个与数据匹配良好的参数范围。(摘要截断于400字)

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