Crisma M, Valle G, Toniolo C, Prasad S, Rao R B, Balaram P
Department of Organic Chemistry, University of Padova, Italy.
Biopolymers. 1995 Jan;35(1):1-9. doi: 10.1002/bip.360350102.
The crystal state conformations of three peptides containing the alpha,alpha-dialkylated residues, alpha,alpha-di-n-propylglycine (Dpg) and alpha,alpha-di-n-butylglycine (Dbg), have been established by x-ray diffraction. Boc-Ala-Dpg-Ala-OMe (I) and Boc-Ala-Dbg-Ala-OMe (II) adopt distorted type II beta-turn conformations with Ala (1) and Dpg/Dbg (2) as the corner residues. In both peptides the conformational angles at the Dxg residue (I: phi = 66.2 degrees, psi = 19.3 degrees; III: phi = 66.5 degrees, psi = 21.1 degrees) deviate appreciably from ideal values for the i + 2 residue in a type II beta-turn. In both peptides the observed (N...O) distances between the Boc CO and Ala (3) NH groups are far too long (I: 3.44 A; III: 3.63 A) for an intramolecular 4-->1 hydrogen bond. Boc-Ala-Dpg-Ala-NHMe (II) crystallizes with two independent molecules in the asymmetric unit. Both molecules IIA and IIB adopt consecutive beta-turn (type III-III in IIA and type III-I in IIB) or incipient 3(10)-helical structures, stabilized by two intramolecular 4-->1 hydrogen bonds. In all four molecules the bond angle N-C alpha-C' (tau) at the Dxg residues are > or = 110 degrees. The observation of conformational angles in the helical region of phi,psi space at these residues is consistent with theoretical predictions.
通过X射线衍射确定了三种含有α,α-二烷基化残基、α,α-二正丙基甘氨酸(Dpg)和α,α-二正丁基甘氨酸(Dbg)的肽的晶体状态构象。Boc-Ala-Dpg-Ala-OMe(I)和Boc-Ala-Dbg-Ala-OMe(II)采用扭曲的II型β-转角构象,其中Ala(1)和Dpg/Dbg(2)为转角残基。在这两种肽中,Dxg残基处的构象角(I:φ = 66.2°,ψ = 19.3°;III:φ = 66.5°,ψ = 21.1°)与II型β-转角中i + 2残基的理想值有明显偏差。在这两种肽中,Boc CO和Ala(3)NH基团之间观察到的(N...O)距离对于分子内4→1氢键来说太长了(I:3.44 Å;III:3.63 Å)。Boc-Ala-Dpg-Ala-NHMe(II)在不对称单元中以两个独立分子结晶。分子IIA和IIB都采用连续的β-转角(IIA中为III-III型,IIB中为III-I型)或初始的3(10)-螺旋结构,由两个分子内4→1氢键稳定。在所有四个分子中,Dxg残基处的键角N-Cα-C'(τ)≥110°。在这些残基的φ,ψ空间螺旋区域中构象角的观察结果与理论预测一致。