Wu J Q, Macgregor R B
Faculty of Pharmacy, University of Toronto, Ontario, Canada.
Biopolymers. 1995 Apr;35(4):369-76. doi: 10.1002/bip.360350404.
The pressure dependence of the helix-coil transition temperature (Tm) of poly[d(G-C)] was studied as a function of sodium ion concentration in phosphate buffer. The molar volume change of the transition (delta V) was calculated using the Clapeyron equation and calorimetrically determined enthalpies. The delta V of the transition increased from +4.80 (+/- 0.56) to +6.03 (+/- 0.76) mL mol-1 as the sodium ion concentration changed from 0.052 to 1.0M. The van't Hoff enthalpy of the transition calculated from the half-width of the differentiated transition displayed negligible pressure dependence; however, the value of this parameter decreased with increasing sodium ion concentration, indicating a decrease in the size of the cooperative unit. The volume change of the transition exhibits the largest magnitude of any double-stranded DNA polymer measured using this technique. For poly[d(G-C)] the magnitude of the change in delta V with sodium ion concentration (0.94 +/- 0.05 mL mol-1) is approximately one-half that observed for either poly[d(A-T)] or poly(dA).poly(dT). The delta V values are interpreted as arising from changes in the hydration of the polymer due to the release of counterions and changes in the stacking of the bases of the coil form. As a consequence of solvent electrostriction, the release of counterions makes a net negative contribution to the total delta V, implying that disruption of the stacking interactions contributes a positive volume change to the total delta V.(ABSTRACT TRUNCATED AT 250 WORDS)
在磷酸盐缓冲液中,研究了聚[d(G-C)]的螺旋-线圈转变温度(Tm)对钠离子浓度的依赖性。利用克拉佩龙方程和量热法测定的焓,计算了转变的摩尔体积变化(ΔV)。随着钠离子浓度从0.052 M变化到1.0 M,转变的ΔV从+4.80(±0.56)增加到+6.03(±0.76)mL·mol⁻¹。由微分转变的半峰宽计算得到的转变范特霍夫焓显示出可忽略的压力依赖性;然而,该参数的值随着钠离子浓度的增加而降低,表明协同单元的尺寸减小。使用该技术测量的任何双链DNA聚合物中,转变的体积变化幅度最大。对于聚[d(G-C)],ΔV随钠离子浓度的变化幅度(0.94±0.05 mL·mol⁻¹)约为聚[d(A-T)]或聚(dA)·聚(dT)的一半。ΔV值被解释为由于抗衡离子的释放导致聚合物水合作用的变化以及线圈形式碱基堆积的变化。由于溶剂电致伸缩,抗衡离子的释放对总ΔV产生净负贡献,这意味着堆积相互作用的破坏对总ΔV产生正的体积变化。(摘要截短于250字)