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含2'-乙酰氨基-2'-脱氧核糖核苷的锤头状核酶的催化活性和稳定性

Catalytic activity and stability of hammerhead ribozymes containing 2'-acetamido-2'-deoxyribonucleosides.

作者信息

Hendrix C, Mahieu M, Anné J, Van Calenbergh S, Van Aerschot A, Content J, Herdewijn P

机构信息

Laboratory for Medicinal Chemistry, Rega Institute, K. U. Leuven, Belgium.

出版信息

Biochem Biophys Res Commun. 1995 May 5;210(1):67-73. doi: 10.1006/bbrc.1995.1628.

DOI:10.1006/bbrc.1995.1628
PMID:7741750
Abstract

Hammerhead ribozymes may be of great therapeutic importance, since they can, in theory, be developed to cleave any undesired target RNA. In order to design ribozymes which are stable against endogenous RNases, we incorporated 2'-acetamido-2'-deoxynucleosides in the catalytic core of a hammerhead ribozyme. The 2'-acetamido function has, like the hydroxyl group, both proton donor and proton acceptor capacities, which seem to be crucial for efficient catalytic activity. However, the presence of 2'-acetamido-2'-deoxypyrimidine residues in the catalytic core caused a considerable drop in cleavage rate. Replacement of the purine residues led to complete loss of the catalytic activity. Surprisingly, these 2'-modifications showed no beneficial influence on the stability of the ribozymes against RNases present in cell culture supernatant containing 10% fetal calf serum.

摘要

锤头状核酶可能具有重大的治疗意义,因为理论上它们可以被开发用于切割任何不需要的靶RNA。为了设计对内源性核糖核酸酶稳定的核酶,我们在锤头状核酶的催化核心中引入了2'-乙酰氨基-2'-脱氧核苷。2'-乙酰氨基官能团与羟基一样,具有质子供体和质子受体能力,这似乎对高效催化活性至关重要。然而,催化核心中2'-乙酰氨基-2'-脱氧嘧啶残基的存在导致切割速率大幅下降。嘌呤残基的替换导致催化活性完全丧失。令人惊讶的是,这些2'-修饰对核酶在含有10%胎牛血清的细胞培养上清液中对核糖核酸酶的稳定性没有产生有益影响。

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Catalytic activity and stability of hammerhead ribozymes containing 2'-acetamido-2'-deoxyribonucleosides.含2'-乙酰氨基-2'-脱氧核糖核苷的锤头状核酶的催化活性和稳定性
Biochem Biophys Res Commun. 1995 May 5;210(1):67-73. doi: 10.1006/bbrc.1995.1628.
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Importance of specific purine-pyrimidine amino and hydroxyl groups for efficient cleavage by a hammerhead ribozyme.特定嘌呤 - 嘧啶氨基和羟基对锤头状核酶高效切割的重要性。
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Importance of specific purine amino and hydroxyl groups for efficient cleavage by a hammerhead ribozyme.特定嘌呤氨基和羟基对锤头状核酶高效切割的重要性。
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Hammerhead ribozymes targeted to the FBN1 mRNA can discriminate a single base mismatch between ribozyme and target.靶向FBN1 mRNA的锤头状核酶能够区分核酶与靶标之间的单个碱基错配。
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A three-nucleotide helix I is sufficient for full activity of a hammerhead ribozyme: advantages of an asymmetric design.三核苷酸螺旋I对于锤头状核酶的完全活性是足够的:不对称设计的优势。
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Nucleic Acids Res. 2004 Jun 28;32(11):3446-55. doi: 10.1093/nar/gkh658. Print 2004.
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Hammerhead ribozyme kinetics.锤头状核酶动力学
RNA. 1998 Aug;4(8):875-89. doi: 10.1017/s1355838298980876.
3
Selection of hammerhead ribozymes for optimum cleavage of interleukin 6 mRNA.选择锤头状核酶以实现白细胞介素6信使核糖核酸的最佳切割
Biochem J. 1996 Mar 1;314 ( Pt 2)(Pt 2):655-61. doi: 10.1042/bj3140655.