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小鼠和人类中类视黄醇X受体B基因的物理图谱

Physical mapping of the retinoid X receptor B gene in mouse and human.

作者信息

Nagata T, Weiss E H, Abe K, Kitagawa K, Ando A, Yara-Kikuti Y, Seldin M F, Ozato K, Inoko H, Taketo M

机构信息

Banyu Tsukuba Research Institute (Merck), Japan.

出版信息

Immunogenetics. 1995;41(2-3):83-90. doi: 10.1007/BF00182317.

DOI:10.1007/BF00182317
PMID:7806300
Abstract

Retinoid X receptors (RXRs) are zinc finger-containing nuclear transcription factors. They belong to the nuclear receptor superfamily that contains retinoid receptors, vitamin D receptors, thyroid hormone receptors, and steroid hormone receptors as well as the so-called orphan receptors. We previously mapped all three RXR genes on mouse chromosomes, using a panel of Mus spretus-Mus musculus interspecific backcross mice: Namely, the RXRA-gene (Rxra) on Chr 2 near the centromere, the RXRB gene (Rxrb) on Chr 17 in the H2 region, and the RXRG gene (Rxrg) on distal Chr 1. Using cosmid clones that cover the major histocompatibility complex (MHC) region, we determined the precise physical map positions of the gene encoding mouse and human RXRB, respectively. The mouse gene (Rxrb) maps between H2-Ke4 and H2-Ke5: namely, immediately telomeric to H2-Ke4 which encodes a histidine-rich transmembrane protein, and 12 kilobases centromeric to H2-Ke5 which is expressed in lymphoid tissues. Rxrb and H2-Ke4 are transcribed into opposite directions from a CpG-rich promoter of about 250 base pairs. This gene organization is well conserved also in the human genome at the HLA-DP subregion of Chr 6p, underscoring the strong conservation of the gene organization in the MHC region between the two mammals.

摘要

视黄酸X受体(RXRs)是含锌指结构的核转录因子。它们属于核受体超家族,该家族包含视黄酸受体、维生素D受体、甲状腺激素受体、类固醇激素受体以及所谓的孤儿受体。我们先前利用一组小家鼠-家鼠种间回交小鼠,将所有三个RXR基因定位到了小鼠染色体上:即,位于2号染色体着丝粒附近的RXRA基因(Rxra),位于17号染色体H2区域的RXRB基因(Rxrb),以及位于1号染色体远端的RXRG基因(Rxrg)。利用覆盖主要组织相容性复合体(MHC)区域的黏粒克隆,我们分别确定了编码小鼠和人类RXRB的基因的精确物理图谱位置。小鼠基因(Rxrb)定位于H2-Ke4和H2-Ke5之间:即,紧邻编码富含组氨酸的跨膜蛋白的H2-Ke4的端粒侧,且位于在淋巴组织中表达的H2-Ke5的着丝粒侧12千碱基处。Rxrb和H2-Ke4从一个约250个碱基对的富含CpG的启动子以相反方向转录。在人类基因组6号染色体p臂的HLA-DP亚区域,这种基因组织也得到了很好的保守,这突出了这两种哺乳动物MHC区域中基因组织的高度保守性。

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本文引用的文献

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Downregulation of Ke 6, a novel gene encoded within the major histocompatibility complex, in murine polycystic kidney disease.主要组织相容性复合体中编码的新基因Ke 6在小鼠多囊肾病中的下调。
Mol Cell Biol. 1993 Mar;13(3):1847-53. doi: 10.1128/mcb.13.3.1847-1853.1993.
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The mouse retinoid-X receptor-gamma gene: genomic organization and evidence for functional isoforms.小鼠维甲酸X受体γ基因:基因组结构及功能性异构体的证据
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Cloning and chromosome mapping of human retinoid X receptor beta: selective amino acid sequence conservation of a nuclear hormone receptor in mammals.
大鼠主要组织相容性复合体中Ring1、Ring2、Ke6、Ke4、Rxrb、Col11a2和RT1.Hb基因的物理图谱
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Two genes abrogate the inhibition of murine hepatocarcinogenesis by ovarian hormones.两个基因消除了卵巢激素对小鼠肝癌发生的抑制作用。
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Hum Genet. 1993 Jan;90(5):505-10. doi: 10.1007/BF00217449.
4
Retinoic acid receptors and retinoid X receptors: interactions with endogenous retinoic acids.维甲酸受体和类视黄醇X受体:与内源性维甲酸的相互作用
Proc Natl Acad Sci U S A. 1993 Jan 1;90(1):30-4. doi: 10.1073/pnas.90.1.30.
5
Encyclopedia of the mouse genome III. October 1993. Mouse chromosome 17.《小鼠基因组百科全书III》。1993年10月。小鼠第17号染色体。
Mamm Genome. 1993;4 Spec No:S230-52. doi: 10.1007/BF00360843.
6
Mapping of RXRB to human chromosome 6p21.3.视黄酸X受体β(RXRB)基因定位于人类6号染色体短臂21.3区。
Ann Hum Genet. 1993 Jul;57(3):203-9. doi: 10.1111/j.1469-1809.1993.tb01596.x.
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Jpn J Genet. 1993 Jun;68(3):175-84. doi: 10.1266/jjg.68.175.
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9
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