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关于蛋白水解酶及其抑制剂反应中心的高变异性

On hypervariability at the reactive center of proteolytic enzymes and their inhibitors.

作者信息

Ohta T

机构信息

National Institute of Genetics, Mishima, Japan.

出版信息

J Mol Evol. 1994 Dec;39(6):614-9. doi: 10.1007/BF00160406.

DOI:10.1007/BF00160406
PMID:7807549
Abstract

The pattern of synonymous and nonsynonymous substitutions at the reactive center of proteases (kallikrein) and their inhibitors (alpha 1-antitrypsin and serpin) was examined. In the case of alpha 1-antitrypsin, the proportion of different nonsynonymous sites exceeds that of different synonymous sites at the reactive center for sequence pairs of recent duplication. The result indicates that the positive selection has operated after duplication to increase functional diversity. In the cases of kallikrein, serpin, and remote sequence pairs of alpha 1-antitrypsin, the proportion of different synonymous sites at the reactive center exceeds that of different synonymous sites at the remaining region. The result indicates that gene conversion followed by natural selection is working. On the whole, it is concluded that hypervariability of amino acids at the reactive center is generated by an interaction among natural selection, random genetic drift, point mutation, and gene conversion. Gene duplication may provide potential for them to interact.

摘要

研究了蛋白酶(激肽释放酶)及其抑制剂(α1-抗胰蛋白酶和丝氨酸蛋白酶抑制剂)反应中心的同义替换和非同义替换模式。就α1-抗胰蛋白酶而言,对于近期复制的序列对,反应中心不同非同义位点的比例超过了不同同义位点的比例。结果表明,复制后正向选择起作用以增加功能多样性。在激肽释放酶、丝氨酸蛋白酶抑制剂以及α1-抗胰蛋白酶的远缘序列对的情况下,反应中心不同同义位点的比例超过了其余区域不同同义位点的比例。结果表明基因转换随后伴随自然选择在起作用。总体而言,得出的结论是,反应中心氨基酸的高变异性是由自然选择、随机遗传漂变、点突变和基因转换之间的相互作用产生的。基因复制可能为它们的相互作用提供了潜力。

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本文引用的文献

1
Positive selection for colicin diversity in bacteria.细菌中大肠杆菌素多样性的正向选择
Mol Biol Evol. 1993 Sep;10(5):1048-59. doi: 10.1093/oxfordjournals.molbev.a040054.
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Haplotype diversity in the human red and green opsin genes: evidence for frequent sequence exchange in exon 3.人类红视蛋白和绿视蛋白基因的单倍型多样性:第3外显子频繁序列交换的证据。
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胰蛋白酶抑制剂 panulirin 调控刺龙虾 Panulirus argus 中的酚氧化酶原激活系统。
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Evolution of disintegrin cysteine-rich and mammalian matrix-degrading metalloproteinases: gene duplication and divergence of a common ancestor rather than convergent evolution.去整合素富含半胱氨酸和哺乳动物基质降解金属蛋白酶的进化:共同祖先的基因复制和分化而非趋同进化。
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Protein inhibitors of proteinases.蛋白酶的蛋白质抑制剂。
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Positive darwinian selection in evolution of protein inhibitors of serine proteinases.丝氨酸蛋白酶蛋白抑制剂进化过程中的正向达尔文选择。
Cold Spring Harb Symp Quant Biol. 1987;52:545-53. doi: 10.1101/sqb.1987.052.01.062.
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Accelerated evolution in the reactive centre regions of serine protease inhibitors.丝氨酸蛋白酶抑制剂反应中心区域的加速进化。
Nature. 1987;326(6108):96-9. doi: 10.1038/326096a0.
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Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions.估计同义与非同义核苷酸替换数目的简单方法。
Mol Biol Evol. 1986 Sep;3(5):418-26. doi: 10.1093/oxfordjournals.molbev.a040410.
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Functional evolutionary divergence of proteolytic enzymes and their inhibitors.
Trends Biochem Sci. 1989 Aug;14(8):319-24. doi: 10.1016/0968-0004(89)90159-x.