• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

家蚕类吉普赛逆转录转座子mag的结构特征,具有异常短的末端重复序列。

Structural features of mag, a gypsy-like retrotransposon of Bombyx mori, with unusual short terminal repeats.

作者信息

Garel A, Nony P, Prudhomme J C

机构信息

Université Claude Bernard, Lyon 1, Centre de Génétique Moléculaire et Cellulaire, UMR 106, Villeurbanne, France.

出版信息

Genetica. 1994;93(1-3):125-37. doi: 10.1007/BF01435245.

DOI:10.1007/BF01435245
PMID:7813909
Abstract

Mag is a retrotransposon found as an insert in the Sericin 2 gene. It is present in a few copies--4 to 15--dispersed in the genome of different strains of Bombyx mori as well as in Bombyx mandarina. Flanked by a 5 bp target sequence with no sequence specificity, it is bordered by direct repeats of 77 nucleotides. Despite their unusual short size, these terminal repeats and their immediately adjacent sequences present all the signals necessary for transcription into genomic RNA and for reverse transcription. Mag contains two overlapping open reading frames which are organized as the gag and pol genes of retroviruses and encode putative nucleic acid binding peptide, protease, reverse transcriptase, RNase H and endonuclease in this order. Sequence comparison of these proteins places mag within the gypsy group of LTR retrotransposons next to the echinoderm element SURL.

摘要

Mag是一种逆转录转座子,作为插入序列存在于丝胶蛋白2基因中。它以4到15个拷贝的形式存在,分散在不同家蚕品系以及野桑蚕的基因组中。它两侧是一个没有序列特异性的5bp靶序列,边界是77个核苷酸的正向重复序列。尽管这些末端重复序列及其紧邻序列异常短小,但它们呈现出转录为基因组RNA和逆转录所需的所有信号。Mag包含两个重叠的开放阅读框,其组织方式与逆转录病毒的gag和pol基因相同,并依次编码假定的核酸结合肽、蛋白酶、逆转录酶、RNase H和内切核酸酶。这些蛋白质的序列比较将mag置于LTR逆转录转座子的吉普赛组中,紧挨着棘皮动物元件SURL。

相似文献

1
Structural features of mag, a gypsy-like retrotransposon of Bombyx mori, with unusual short terminal repeats.家蚕类吉普赛逆转录转座子mag的结构特征,具有异常短的末端重复序列。
Genetica. 1994;93(1-3):125-37. doi: 10.1007/BF01435245.
2
Two novel Pao-like retrotransposons (Kamikaze and Yamato) from the silkworm species Bombyx mori and B. mandarina: common structural features of Pao-like elements.来自家蚕和野桑蚕的两种新型类Pao逆转座子(神风特攻队和大和号):类Pao元件的共同结构特征。
Mol Genet Genomics. 2001 Apr;265(2):375-85. doi: 10.1007/s004380000428.
3
REAL, an LTR retrotransposon from the plant pathogenic fungus Alternaria alternata.REAL,一种来自植物病原真菌链格孢菌的长末端重复逆转座子。
Mol Gen Genet. 2000 May;263(4):625-34. doi: 10.1007/s004380051210.
4
A defective non-LTR retrotransposon is dispersed throughout the genome of the silkworm, Bombyx mori.一种有缺陷的非长末端重复序列逆转座子分散在家蚕(Bombyx mori)的整个基因组中。
Chromosoma. 1994 Sep;103(5):311-23. doi: 10.1007/BF00417878.
5
Structural analysis of TRAS1, a novel family of telomeric repeat-associated retrotransposons in the silkworm, Bombyx mori.家蚕中新型端粒重复序列相关反转录转座子家族TRAS1的结构分析
Mol Cell Biol. 1995 Aug;15(8):4545-52. doi: 10.1128/MCB.15.8.4545.
6
A major non-LTR retrotransposon of Bombyx mori, L1Bm.家蚕的一种主要非长末端重复序列逆转座子,L1Bm。
J Mol Evol. 1997 Sep;45(3):253-64. doi: 10.1007/pl00006228.
7
Phylogenetic relationships of reverse transcriptase and RNase H sequences and aspects of genome structure in the gypsy group of retrotransposons.逆转录转座子吉普赛族中逆转录酶和核糖核酸酶H序列的系统发育关系及基因组结构方面
Mol Biol Evol. 1993 Nov;10(6):1370-9. doi: 10.1093/oxfordjournals.molbev.a040065.
8
A new family of site-specific retrotransposons, SART1, is inserted into telomeric repeats of the silkworm, Bombyx mori.一个新的位点特异性逆转座子家族SART1插入到家蚕的端粒重复序列中。
Nucleic Acids Res. 1997 Apr 15;25(8):1578-84. doi: 10.1093/nar/25.8.1578.
9
Jule from the fish Xiphophorus is the first complete vertebrate Ty3/Gypsy retrotransposon from the Mag family.来自剑尾鱼属鱼类的Jule是首个来自Mag家族的完整脊椎动物Ty3/Gypsy逆转录转座子。
Mol Biol Evol. 2001 Feb;18(2):101-11. doi: 10.1093/oxfordjournals.molbev.a003784.
10
Skippy, a retrotransposon from the fungal plant pathogen Fusarium oxysporum.Skippy,一种来自真菌植物病原体尖孢镰刀菌的逆转座子。
Mol Gen Genet. 1995 Dec 20;249(6):637-47. doi: 10.1007/BF00418033.

引用本文的文献

1
Isolation and characterization of Y chromosome sequences from the African malaria mosquito Anopheles gambiae.冈比亚按蚊(非洲疟疾蚊子)Y染色体序列的分离与鉴定。
Genetics. 2004 Mar;166(3):1291-302. doi: 10.1534/genetics.166.3.1291.

本文引用的文献

1
Molecular mechanisms of transposition and its control.
Cell. 1993 Sep 10;74(5):781-6. doi: 10.1016/0092-8674(93)90458-3.
2
Pao, a highly divergent retrotransposable element from Bombyx mori containing long terminal repeats with tandem copies of the putative R region.Pao是一种来自家蚕的高度分化的反转录转座元件,含有长末端重复序列以及假定R区域的串联拷贝。
Nucleic Acids Res. 1993 May 11;21(9):2117-23. doi: 10.1093/nar/21.9.2117.
3
Dong, a non-long terminal repeat (non-LTR) retrotransposable element from Bombyx mori.董,一种来自家蚕的非长末端重复(non-LTR)逆转座子元件。
Nucleic Acids Res. 1993 Mar 11;21(5):1318. doi: 10.1093/nar/21.5.1318.
4
Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition.R2Bm RNA的逆转录由染色体靶位点的一个切口引发:一种非LTR逆转座机制。
Cell. 1993 Feb 26;72(4):595-605. doi: 10.1016/0092-8674(93)90078-5.
5
Phylogenetic relationships of reverse transcriptase and RNase H sequences and aspects of genome structure in the gypsy group of retrotransposons.逆转录转座子吉普赛族中逆转录酶和核糖核酸酶H序列的系统发育关系及基因组结构方面
Mol Biol Evol. 1993 Nov;10(6):1370-9. doi: 10.1093/oxfordjournals.molbev.a040065.
6
A walk in the chorion locus of Bombyx mori.家蚕绒毛膜位点漫步
Cell. 1982 Jun;29(2):633-43. doi: 10.1016/0092-8674(82)90179-9.
7
The 5- flanking sequences of Drosophila tRNAArg genes control their in vitro transcription in a Drosophila cell extract.果蝇tRNA精氨酸基因的5'侧翼序列在果蝇细胞提取物中控制其体外转录。
J Biol Chem. 1982 Dec 25;257(24):14738-44.
8
Ribosomal DNA genes of Bombyx mori: a minor fraction of the repeating units contain insertions.家蚕核糖体DNA基因:重复单元中的一小部分含有插入序列。
Nucleic Acids Res. 1984 Jun 11;12(11):4703-13. doi: 10.1093/nar/12.11.4703.
9
Nucleotide sequence of Rous sarcoma virus.劳氏肉瘤病毒的核苷酸序列。
Cell. 1983 Mar;32(3):853-69. doi: 10.1016/0092-8674(83)90071-5.
10
A virus mutant with an insertion of a copia-like transposable element.一种插入了类copia转座元件的病毒突变体。
Nature. 1982 Oct 7;299(5883):562-4. doi: 10.1038/299562a0.