• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

使用T4核酸内切酶VII通过酶错配切割筛选突变。

Screening for mutations by enzyme mismatch cleavage with T4 endonuclease VII.

作者信息

Youil R, Kemper B W, Cotton R G

机构信息

Olive Miller Laboratory, Murdoch Institute, Royal Children's Hospital, Parkville, Victoria, Australia.

出版信息

Proc Natl Acad Sci U S A. 1995 Jan 3;92(1):87-91. doi: 10.1073/pnas.92.1.87.

DOI:10.1073/pnas.92.1.87
PMID:7816853
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC42822/
Abstract

Each of four possible sets of mismatches (G.A/C.T, C.C/G.G, A.A/T.T, and C.A/G.T) containing the 8 possible single-base-pair mismatches derived from isolated mutations were examined to test the ability of T4 endonuclease VII to consistently detect mismatches in heteroduplexes. At least two examples of each set of mismatches were studied for cleavage in the complementary pairs of heteroduplexes formed between normal and mutant DNA. Four deletion mutations were also included in this study. The various PCR-derived products used in the formation of heteroduplexes ranged from 133 to 1502 bp. At least one example of each set showed cleavage of at least one strand containing a mismatch. Cleavage of at least one strand of the pairs of heteroduplexes occurred in 17 of the 18 known single-base-pair mutations tested, with an A.A/T.T set not being cleaved in any mismatched strand. We propose that this method may be effective in detecting and positioning almost all mutational changes when DNA is screened for mutations.

摘要

对从分离的突变中衍生出的8种可能的单碱基对错配所构成的四种可能的错配组合(G.A/C.T、C.C/G.G、A.A/T.T和C.A/G.T)分别进行了检测,以测试T4核酸内切酶VII在异源双链体中持续检测错配的能力。针对正常DNA与突变DNA形成的异源双链体互补对中的切割情况,对每组错配至少研究了两个实例。本研究还纳入了四个缺失突变。用于形成异源双链体的各种PCR衍生产物长度在133至1502 bp之间。每组中至少有一个实例显示含有错配的至少一条链发生了切割。在测试的18个已知单碱基对突变中,有17个的异源双链体对中至少有一条链发生了切割,而A.A/T.T组合的任何错配链均未被切割。我们认为,当筛选DNA中的突变时,该方法可能在检测和定位几乎所有突变变化方面有效。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2128/42822/d909c5b3e89e/pnas01479-0107-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2128/42822/42134fd7223c/pnas01479-0105-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2128/42822/9bb34a0e2683/pnas01479-0106-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2128/42822/c4993cfe6d21/pnas01479-0106-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2128/42822/d909c5b3e89e/pnas01479-0107-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2128/42822/42134fd7223c/pnas01479-0105-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2128/42822/9bb34a0e2683/pnas01479-0106-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2128/42822/c4993cfe6d21/pnas01479-0106-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2128/42822/d909c5b3e89e/pnas01479-0107-a.jpg

相似文献

1
Screening for mutations by enzyme mismatch cleavage with T4 endonuclease VII.使用T4核酸内切酶VII通过酶错配切割筛选突变。
Proc Natl Acad Sci U S A. 1995 Jan 3;92(1):87-91. doi: 10.1073/pnas.92.1.87.
2
Detection of mutations by cleavage of DNA heteroduplexes with bacteriophage resolvases.利用噬菌体解离酶切割DNA异源双链体检测突变
Nat Genet. 1995 Feb;9(2):177-83. doi: 10.1038/ng0295-177.
3
Detection of 81 of 81 known mouse beta-globin promoter mutations with T4 endonuclease VII--the EMC method.利用T4核酸内切酶VII——EMC方法检测81个已知小鼠β-珠蛋白启动子突变中的81个。
Genomics. 1996 Mar 15;32(3):431-5. doi: 10.1006/geno.1996.0138.
4
Endonuclease VII of phage T4 triggers mismatch correction in vitro.噬菌体T4的核酸内切酶VII在体外触发错配校正。
J Mol Biol. 1993 Apr 5;230(3):868-77. doi: 10.1006/jmbi.1993.1207.
5
Conformation-sensitive gel electrophoresis for rapid detection of single-base differences in double-stranded PCR products and DNA fragments: evidence for solvent-induced bends in DNA heteroduplexes.用于快速检测双链PCR产物和DNA片段中单碱基差异的构象敏感性凝胶电泳:DNA异源双链体中溶剂诱导弯曲的证据
Proc Natl Acad Sci U S A. 1993 Nov 1;90(21):10325-9. doi: 10.1073/pnas.90.21.10325.
6
Analysis of the hereditary pancreatitis-associated cationic trypsinogen gene mutations in exons 2 and 3 by enzymatic mutation detection from a single 2.2-kb polymerase chain reaction product.通过从单一2.2kb聚合酶链反应产物进行酶促突变检测,分析外显子2和3中与遗传性胰腺炎相关的阳离子胰蛋白酶原基因突变。
Mol Diagn. 1999 Sep;4(3):211-8. doi: 10.1016/s1084-8592(99)80024-1.
7
In vitro processing of heteroduplex loops and mismatches by endonuclease VII.核酸内切酶VII对异源双链环和错配的体外加工
DNA Res. 1995;2(1):9-14. doi: 10.1093/dnares/2.1.9.
8
Reactivity of cytosine and thymine in single-base-pair mismatches with hydroxylamine and osmium tetroxide and its application to the study of mutations.单碱基对错配中胞嘧啶和胸腺嘧啶与羟胺和四氧化锇的反应性及其在突变研究中的应用
Proc Natl Acad Sci U S A. 1988 Jun;85(12):4397-401. doi: 10.1073/pnas.85.12.4397.
9
Base mismatch-specific endonuclease activity in extracts from Saccharomyces cerevisiae.酿酒酵母提取物中的碱基错配特异性内切核酸酶活性。
Nucleic Acids Res. 1991 Sep 11;19(17):4761-6. doi: 10.1093/nar/19.17.4761.
10
The use of resolvases T4 endonuclease VII and T7 endonuclease I in mutation detection.在突变检测中使用核酸内切酶T4内切核酸酶VII和T7内切核酸酶I。
Methods Mol Biol. 2000;152:187-99. doi: 10.1385/1-59259-068-3:187.

引用本文的文献

1
Enzymatic Methods for Mutation Detection in Cancer Samples and Liquid Biopsies.癌症样本和液体活检测序中基因突变的酶学法检测。
Int J Mol Sci. 2023 Jan 4;24(2):923. doi: 10.3390/ijms24020923.
2
INDEL detection, the 'Achilles heel' of precise genome editing: a survey of methods for accurate profiling of gene editing induced indels.INDEL 检测是精确基因组编辑的“阿喀琉斯之踵”:基因编辑诱导 INDEL 精确分析方法综述。
Nucleic Acids Res. 2020 Dec 2;48(21):11958-11981. doi: 10.1093/nar/gkaa975.
3
Efficient In Vivo Liver-Directed Gene Editing Using CRISPR/Cas9.

本文引用的文献

1
Identification and in vitro expression of mutations causing dihydropteridine reductase deficiency.导致二氢蝶啶还原酶缺乏症的突变的鉴定及体外表达
Biochemistry. 1993 Jun 29;32(25):6443-9. doi: 10.1021/bi00076a018.
2
Endonuclease VII of phage T4 triggers mismatch correction in vitro.噬菌体T4的核酸内切酶VII在体外触发错配校正。
J Mol Biol. 1993 Apr 5;230(3):868-77. doi: 10.1006/jmbi.1993.1207.
3
Chemical cleavage of mismatch to detect mutations.错配化学切割法检测突变
利用 CRISPR/Cas9 实现高效的活体肝脏基因编辑。
Mol Ther. 2018 May 2;26(5):1241-1254. doi: 10.1016/j.ymthe.2018.02.023. Epub 2018 Mar 6.
4
Diff-seq: A high throughput sequencing-based mismatch detection assay for DNA variant enrichment and discovery.Diff-seq:一种基于高通量测序的错配检测分析方法,用于 DNA 变异富集和发现。
Nucleic Acids Res. 2018 Apr 20;46(7):e42. doi: 10.1093/nar/gky022.
5
A systematic comparison of error correction enzymes by next-generation sequencing.通过下一代测序对纠错酶进行系统比较。
Nucleic Acids Res. 2017 Sep 6;45(15):9206-9217. doi: 10.1093/nar/gkx691.
6
Comparison of T7E1 and surveyor mismatch cleavage assays to detect mutations triggered by engineered nucleases.比较T7E1和Surveyor错配切割检测法以检测由工程核酸酶引发的突变。
G3 (Bethesda). 2015 Jan 7;5(3):407-15. doi: 10.1534/g3.114.015834.
7
Clinical-pathologic significance of cancer stem cell marker expression in familial breast cancers.家族性乳腺癌中癌症干细胞标志物表达的临床病理意义。
Breast Cancer Res Treat. 2013 Jul;140(1):195-205. doi: 10.1007/s10549-013-2591-1. Epub 2013 Jun 28.
8
Fluorescence detection of single-nucleotide polymorphisms with a single, self-complementary, triple-stem DNA probe.使用单个自互补三链DNA探针进行单核苷酸多态性的荧光检测。
Angew Chem Int Ed Engl. 2009;48(24):4354-8. doi: 10.1002/anie.200900369.
9
Robust physical methods that enrich genomic regions identical by descent for linkage studies: confirmation of a locus for osteogenesis imperfecta.用于连锁研究的、富集同源基因组区域的强大物理方法:成骨不全症一个基因座的确认
BMC Genet. 2009 Mar 30;10:16. doi: 10.1186/1471-2156-10-16.
10
s-RT-MELT for rapid mutation scanning using enzymatic selection and real time DNA-melting: new potential for multiplex genetic analysis.利用酶促筛选和实时DNA熔解进行快速突变扫描的s-RT-MELT:多重基因分析的新潜力。
Nucleic Acids Res. 2007;35(12):e84. doi: 10.1093/nar/gkm403. Epub 2007 Jun 1.
Methods Enzymol. 1993;217:286-95. doi: 10.1016/0076-6879(93)17069-h.
4
A new codon 15 rhodopsin gene mutation in autosomal dominant retinitis pigmentosa is associated with sectorial disease.常染色体显性遗传性视网膜色素变性中一种新的第15密码子视紫红质基因突变与扇形病变相关。
Arch Ophthalmol. 1993 Nov;111(11):1512-7. doi: 10.1001/archopht.1993.01090110078029.
5
Mutations in the murine homologue of the Menkes gene in dappled and blotchy mice.斑驳和斑点小鼠中门克斯基因的小鼠同源基因的突变。
Nat Genet. 1994 Apr;6(4):374-8. doi: 10.1038/ng0494-374.
6
Current methods of mutation detection.当前的突变检测方法。
Mutat Res. 1993 Jan;285(1):125-44. doi: 10.1016/0027-5107(93)90060-s.
7
T4 endonuclease VII cleaves holliday structures.T4 核酸内切酶 VII 可切割霍利迪结构。
Cell. 1982 Jun;29(2):357-65. doi: 10.1016/0092-8674(82)90152-0.
8
Initiation of heteroduplex-loop repair by T4-encoded endonuclease VII in vitro.T4编码的核酸内切酶VII在体外启动异源双链环修复。
EMBO J. 1988 May;7(5):1527-35. doi: 10.1002/j.1460-2075.1988.tb02972.x.
9
Screening for phenylketonuria mutations by DNA amplification with the polymerase chain reaction.通过聚合酶链反应进行DNA扩增来筛查苯丙酮尿症突变。
Lancet. 1988 Mar 5;1(8584):497-9. doi: 10.1016/s0140-6736(88)91295-0.
10
Pyruvate dehydrogenase deficiency caused by deletion of a 7-bp repeat sequence in the E1 alpha gene.
Am J Hum Genet. 1990 Aug;47(2):286-93.