Watts A
Department of Biochemistry, University of Oxford, U.K.
Biochem Soc Trans. 1994 Aug;22(3):801-5. doi: 10.1042/bst0220801.
The work described here clearly demonstrates that n.m.r. is a viable method with which to resolve molecular details about membrane proteins and can give information at a resolution comparable with that gained from crystallographic studies, where, in the limited number of cases studied so far, such information is available. Sensitivity is not a major problem although other difficulties may prevent particular kinds of information being resolved. However, because bond orientational details are obtained ab initio, the method is quite model independent and interpretationally unique. The requirements for solid-state n.m.r. methods to be applied to a large membrane protein are that: a sufficient amount of functionally active protein is available; the protein should be located in bilayers; and suitable specific isotopic enrichment is achieved, in ideal cases, either by chemical or biosynthetic means. Achieving these requirements will need to draw on a range of skills, possibly genetic or chemical or both, and a full understanding of the biochemistry is essential to ensure that any structural information gained is functionally relevant. The structural information potentially available includes: (a) conformation details about specific parts of a protein or its binding sites; (b) distance measurements between specific labels introduced into the protein; (c) dynamics of particular parts of the protein; (d) chain folding and residue orientation; and (e) the mechanistic changes that can occur during a functional cycle. Much developmental work still needs to be done both on the sample handling instrumental side and with the theoretical aspect of the method.(ABSTRACT TRUNCATED AT 250 WORDS)
本文所述工作清楚地表明,核磁共振是一种可行的方法,可用于解析膜蛋白的分子细节,并且能够提供与晶体学研究相当的分辨率信息,在目前已研究的有限案例中,晶体学研究能提供此类信息。尽管其他困难可能会阻碍解析某些特定类型的信息,但灵敏度并非主要问题。然而,由于键取向细节是从头获得的,该方法相当独立于模型且解释独特。将固态核磁共振方法应用于大型膜蛋白的要求是:有足够量的功能活性蛋白;蛋白应位于双层膜中;并且在理想情况下,通过化学或生物合成手段实现合适的特定同位素富集。满足这些要求需要运用一系列技能,可能是遗传学或化学方面的技能,或者两者兼具,并且全面了解生物化学对于确保所获得的任何结构信息在功能上具有相关性至关重要。潜在可获得的结构信息包括:(a) 蛋白质特定部分或其结合位点的构象细节;(b) 引入蛋白质中的特定标记之间的距离测量;(c) 蛋白质特定部分的动力学;(d) 链折叠和残基取向;以及 (e) 在功能循环过程中可能发生的机制变化。在样品处理仪器方面以及该方法的理论方面仍有许多开发工作要做。(摘要截断于250字)