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人类DBP和TEF基因的染色体定位及cDNA克隆

Chromosomal localization and cDNA cloning of the human DBP and TEF genes.

作者信息

Khatib Z A, Inaba T, Valentine M, Look A T

机构信息

Department of Experimental Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee 38105.

出版信息

Genomics. 1994 Sep 15;23(2):344-51. doi: 10.1006/geno.1994.1510.

Abstract

We have isolated cDNA and genomic clones and determined the human chromosome positions of two genes encoding transcription factors expressed in the liver and the pituitary gland: albumin D-site-binding protein (DBP) and thyrotroph embryonic factor (TEF). Both proteins have been identified as members of the PAR (proline and acidic amino acid-rich) subfamily of bZIP transcription factors in the rat, but human homologues have not been characterized. Using a fluorescence in situ hybridization technique, the DBP locus was assigned to chromosome 19q13, and TEF to chromosome 22q13. Each assignment was confirmed by means of human chromosome segregation in somatic cell hybrids. Coding sequences of DBP and TEF, extending beyond the bZIP domain to the PAR region, were highly conserved in both human-human and interspecies comparisons. Conservation of the exon-intron boundaries of each bZIP domain encoding exon suggested derivation from a common ancestral gene. DBP and TEF mRNAs were expressed in all tissues and cell lines examined, including brain, lung, liver, spleen, and kidney. Knowledge of the human chromosome locations of these PAR proteins will facilitate studies to assess their involvement in carcinogenesis and other fundamental biological processes.

摘要

我们已分离出cDNA和基因组克隆,并确定了在肝脏和垂体中表达的两种编码转录因子的基因在人类染色体上的位置:白蛋白D位点结合蛋白(DBP)和促甲状腺激素胚胎因子(TEF)。在大鼠中,这两种蛋白质均已被鉴定为bZIP转录因子PAR(富含脯氨酸和酸性氨基酸)亚家族的成员,但尚未对人类同源物进行表征。使用荧光原位杂交技术,将DBP基因座定位于19号染色体q13,将TEF定位于22号染色体q13。通过体细胞杂种中的人类染色体分离,证实了每项定位。在人类与人类以及种间比较中,DBP和TEF的编码序列(延伸至bZIP结构域之外直至PAR区域)高度保守。每个编码bZIP结构域的外显子的外显子-内含子边界的保守性表明它们源自共同的祖先基因。DBP和TEF mRNA在所有检测的组织和细胞系中均有表达,包括脑、肺、肝脏、脾脏和肾脏。了解这些PAR蛋白在人类染色体上的位置将有助于评估它们在致癌作用和其他基本生物学过程中的作用的研究。

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