• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一段7个碱基对的序列可保护乳酸乳球菌中的DNA免受核酸外切酶降解。

A 7-base-pair sequence protects DNA from exonucleolytic degradation in Lactococcus lactis.

作者信息

Biswas I, Maguin E, Ehrlich S D, Gruss A

机构信息

Laboratoire de Génétique Microbienne, Institut National de la Recherche Agronomique, Jouy en Josas, France.

出版信息

Proc Natl Acad Sci U S A. 1995 Mar 14;92(6):2244-8. doi: 10.1073/pnas.92.6.2244.

DOI:10.1073/pnas.92.6.2244
PMID:7892255
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC42460/
Abstract

Linear DNA molecules are subject to degradation by various exonucleases in vivo unless their ends are protected. It has been demonstrated that a specific 8-bp sequence, 5'-GCTGGTGG-3', named Chi, can protect linear double-stranded DNA from the major Escherichia coli exonuclease RecBCD. Chi protects linear replication products of rolling-circle plasmids from RecBCD degradation in vivo, in agreement with observations in vitro. A unique 7-bp sequence, 5'-GCGCGTG-3', is shown to protect similar replication products from degradation in Lactococcus lactis strains but not in more distantly related Gram-positive bacteria. The properties of this sequence in L. lactis correspond to those of a Chi site. Linear plasmid replication products have been detected in numerous prokaryotes, suggesting the widespread existence of short species-specific sequences that preserve linear DNA from extensive degradation by host cell exonucleases.

摘要

线性DNA分子在体内会受到各种核酸外切酶的降解,除非其末端受到保护。已经证明,一种特定的8碱基对序列5'-GCTGGTGG-3',称为Chi,可保护线性双链DNA免受大肠杆菌主要核酸外切酶RecBCD的降解。Chi在体内保护滚环质粒的线性复制产物免受RecBCD降解,这与体外观察结果一致。一个独特的7碱基对序列5'-GCGCGTG-3'被证明可保护乳酸乳球菌菌株中的类似复制产物不被降解,但在亲缘关系较远的革兰氏阳性细菌中则不能。该序列在乳酸乳球菌中的特性与Chi位点的特性相对应。在许多原核生物中都检测到了线性质粒复制产物,这表明广泛存在短的物种特异性序列,这些序列可保护线性DNA不被宿主细胞核酸外切酶广泛降解。

相似文献

1
A 7-base-pair sequence protects DNA from exonucleolytic degradation in Lactococcus lactis.一段7个碱基对的序列可保护乳酸乳球菌中的DNA免受核酸外切酶降解。
Proc Natl Acad Sci U S A. 1995 Mar 14;92(6):2244-8. doi: 10.1073/pnas.92.6.2244.
2
Chi sequence protects against RecBCD degradation of DNA in vivo.Chi序列在体内可防止RecBCD对DNA的降解。
Proc Natl Acad Sci U S A. 1992 Dec 15;89(24):12073-7. doi: 10.1073/pnas.89.24.12073.
3
Identification of the lactococcal exonuclease/recombinase and its modulation by the putative Chi sequence.乳酸乳球菌核酸外切酶/重组酶的鉴定及其假定的Chi序列对其的调控
Proc Natl Acad Sci U S A. 1998 Jan 20;95(2):626-31. doi: 10.1073/pnas.95.2.626.
4
Orientation specificity of the Lactococcus lactis Chi site.乳酸乳球菌Chi位点的方向特异性
Genes Cells. 2000 Jun;5(6):453-61. doi: 10.1046/j.1365-2443.2000.00342.x.
5
Chi-dependent formation of linear plasmid DNA in exonuclease-deficient recBCD+ strains of Escherichia coli.大肠杆菌核酸外切酶缺陷型recBCD⁺菌株中依赖Chi的线性质粒DNA形成
J Bacteriol. 1994 Aug;176(16):5093-100. doi: 10.1128/jb.176.16.5093-5100.1994.
6
Identification of the Chi site of Haemophilus influenzae as several sequences related to the Escherichia coli Chi site.鉴定流感嗜血杆菌的Chi位点为与大肠杆菌Chi位点相关的几个序列。
Mol Microbiol. 1998 Mar;27(5):1021-9. doi: 10.1046/j.1365-2958.1998.00749.x.
7
In vivo evidence for two active nuclease motifs in the double-strand break repair enzyme RexAB of Lactococcus lactis.乳酸乳球菌双链断裂修复酶RexAB中两个活性核酸酶基序的体内证据。
J Bacteriol. 2001 Jul;183(13):4071-8. doi: 10.1128/JB.183.13.4071-4078.2001.
8
A five-nucleotide sequence protects DNA from exonucleolytic degradation by AddAB, the RecBCD analogue of Bacillus subtilis.一个五核苷酸序列可保护DNA免受枯草芽孢杆菌的RecBCD类似物AddAB的核酸外切酶降解。
Mol Microbiol. 1998 Sep;29(6):1369-77. doi: 10.1046/j.1365-2958.1998.01018.x.
9
Plasmid recombination by the RecBCD pathway of Escherichia coli.大肠杆菌RecBCD途径介导的质粒重组
J Bacteriol. 1996 Jul;178(13):3840-5. doi: 10.1128/jb.178.13.3840-3845.1996.
10
A novel, 11 nucleotide variant of chi, chi*: one of a class of sequences defining the Escherichia coli recombination hotspot chi.一种新的、11个核苷酸的χ变体,χ*:一类定义大肠杆菌重组热点χ的序列之一。
J Mol Biol. 2000 Jul 14;300(3):469-79. doi: 10.1006/jmbi.2000.3861.

引用本文的文献

1
Lambdoid phages with abundant Chi recombination hotspots reflect diverse viral strategies for recombination-dependent growth.具有丰富Chi重组热点的λ噬菌体反映了依赖重组生长的多种病毒策略。
Genome Res. 2025 Aug 1;35(8):1767-1780. doi: 10.1101/gr.280248.124.
2
Expanding the genome editing toolbox of Saccharomyces cerevisiae with the endonuclease ErCas12a.利用内切酶 ErCas12a 扩展酿酒酵母的基因组编辑工具盒。
FEMS Yeast Res. 2023 Jan 4;23. doi: 10.1093/femsyr/foad043.
3
RecBCD enzyme and Chi recombination hotspots as determinants of self vs. non-self: Myths and mechanisms.

本文引用的文献

1
Improved medium for lactic streptococci and their bacteriophages.用于乳酸链球菌及其噬菌体的改良培养基。
Appl Microbiol. 1975 Jun;29(6):807-13. doi: 10.1128/am.29.6.807-813.1975.
2
High-Frequency Transformation, by Electroporation, of Lactococcus lactis subsp. cremoris Grown with Glycine in Osmotically Stabilized Media.在渗透压稳定的培养基中用甘氨酸培养的乳球菌乳亚种经电穿孔高频转化。
Appl Environ Microbiol. 1989 Dec;55(12):3119-23. doi: 10.1128/aem.55.12.3119-3123.1989.
3
Acute promyelocytic leukemia.急性早幼粒细胞白血病
RecBCD 酶和 Chi 重组热点作为自我与非我的决定因素:神话与机制。
Adv Genet. 2022;109:1-37. doi: 10.1016/bs.adgen.2022.06.001. Epub 2022 Sep 2.
4
Genomic foundations of evolution and ocular pathogenesis in human adenovirus species D.人类腺病毒 D 种的进化和眼部发病机制的基因组基础。
FEBS Lett. 2019 Dec;593(24):3583-3608. doi: 10.1002/1873-3468.13693. Epub 2019 Dec 11.
5
Full-Length Multi-Barcoding: DNA Barcoding from Single Ingredient to Complex Mixtures.全长多条形码:从单一成分到复杂混合物的 DNA 条形码。
Genes (Basel). 2019 May 7;10(5):343. doi: 10.3390/genes10050343.
6
Gram-Positive Bacteria-Like DNA Binding Machineries Involved in Replication Initiation and Termination Mechanisms of Mimivirus.巨细胞病毒复制起始和终止机制中涉及的革兰氏阳性菌样 DNA 结合机制。
Viruses. 2019 Mar 17;11(3):267. doi: 10.3390/v11030267.
7
Modeling the therapeutic efficacy of NFκB synthetic decoy oligodeoxynucleotides (ODNs).模拟核因子κB合成诱饵寡脱氧核苷酸(ODNs)的治疗效果。
BMC Syst Biol. 2018 Jan 30;12(1):4. doi: 10.1186/s12918-018-0525-6.
8
Unexpected DNA context-dependence identifies a new determinant of Chi recombination hotspots.意外的DNA上下文依赖性确定了Chi重组热点的一个新决定因素。
Nucleic Acids Res. 2016 Sep 30;44(17):8216-28. doi: 10.1093/nar/gkw541. Epub 2016 Jun 21.
9
A novel docking domain interface model predicting recombination between homoeologous modular biosynthetic gene clusters.一种新型对接结构域界面模型,可预测同源模块生物合成基因簇之间的重组。
J Ind Microbiol Biotechnol. 2011 Sep;38(9):1295-304. doi: 10.1007/s10295-010-0909-0. Epub 2010 Nov 24.
10
Phylogenetic ubiquity and shuffling of the bacterial RecBCD and AddAB recombination complexes.细菌RecBCD和AddAB重组复合体的系统发育普遍性及改组
J Bacteriol. 2009 Aug;191(16):5076-84. doi: 10.1128/JB.00254-09. Epub 2009 Jun 19.
N Engl J Med. 1993 Jul 15;329(3):177-89. doi: 10.1056/NEJM199307153290307.
4
Segmental organization of embryonic diencephalon.胚胎间脑的节段组织
Nature. 1993 Jun 17;363(6430):630-4. doi: 10.1038/363630a0.
5
The Bacillus subtilis addAB genes are fully functional in Escherichia coli.枯草芽孢杆菌的addAB基因在大肠杆菌中具有完全功能。
Mol Microbiol. 1993 Mar;7(6):915-23. doi: 10.1111/j.1365-2958.1993.tb01182.x.
6
Fusion between a novel Krüppel-like zinc finger gene and the retinoic acid receptor-alpha locus due to a variant t(11;17) translocation associated with acute promyelocytic leukaemia.由于与急性早幼粒细胞白血病相关的一种变异型t(11;17)易位,导致一个新的类Krüppel锌指基因与维甲酸受体α基因座发生融合。
EMBO J. 1993 Mar;12(3):1161-7. doi: 10.1002/j.1460-2075.1993.tb05757.x.
7
odd-paired: a zinc finger pair-rule protein required for the timely activation of engrailed and wingless in Drosophila embryos.奇数配对:一种锌指成对规则蛋白,在果蝇胚胎中对及时激活 engrailed 和 wingless 是必需的。
Genes Dev. 1994 Jan;8(1):105-17. doi: 10.1101/gad.8.1.105.
8
Rescue of mice homozygous for lethal albino deletions: implications for an animal model for the human liver disease tyrosinemia type 1.拯救致死性白化缺失纯合子小鼠:对人类1型酪氨酸血症肝脏疾病动物模型的启示
Genes Dev. 1993 Dec;7(12A):2285-97. doi: 10.1101/gad.7.12a.2285.
9
Perinatal lethality and defects in hindbrain development in mice homozygous for a targeted mutation of the zinc finger gene Krox20.锌指基因Krox20靶向突变纯合子小鼠的围产期致死率及后脑发育缺陷
Genes Dev. 1993 Nov;7(11):2071-84. doi: 10.1101/gad.7.11.2071.
10
The zinc finger gene Krox20 regulates HoxB2 (Hox2.8) during hindbrain segmentation.锌指基因Krox20在后脑节段化过程中调控HoxB2(Hox2.8)。
Cell. 1993 Jan 29;72(2):183-96. doi: 10.1016/0092-8674(93)90659-e.