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蛋白质振动拉曼光学活性光谱中的β-折叠及相关转角特征

Beta-sheet and associated turn signatures in vibrational Raman optical activity spectra of proteins.

作者信息

Wen Z Q, Hecht L, Barron L D

机构信息

Chemistry Department, The University, Glasgow, United Kingdom.

出版信息

Protein Sci. 1994 Mar;3(3):435-9. doi: 10.1002/pro.5560030308.

Abstract

We have measured the aqueous solution vibrational Raman optical activity (ROA) spectra of concanavalin A, alpha-chymotrypsin, and beta-lactoglobulin, all of which are rich in beta-sheet, together with that of the model beta-turn peptide L-pro-L-leu-gly-NH2. Possible ROA signatures of antiparallel beta-sheet include a strong sharp positive band at approximately 1,313 cm-1 associated with backbone amide III C alpha H and NH deformations, and an amide I couplet, negative at low wavenumber and positive at high, centered at approximately 1,658 cm-1. Negative ROA bands in the range approximately 1,340-1,380 cm-1, which might originate in glycine CH2 deformations, appear to be characteristic of beta-turns. Our results provide further evidence that ROA is a more incisive probe of protein conformation than conventional vibrational spectroscopy, infrared, or Raman, because only those few vibrational coordinates within a given normal mode that sample the skeletal chirality directly contribute to the corresponding ROA band intensity.

摘要

我们测量了伴刀豆球蛋白A、α-胰凝乳蛋白酶和β-乳球蛋白的水溶液振动拉曼光学活性(ROA)光谱,这几种蛋白质都富含β-折叠,同时还测量了模型β-转角肽L-脯氨酸-L-亮氨酸-甘氨酸-氨基的ROA光谱。反平行β-折叠可能的ROA特征包括:在约1313 cm⁻¹处有一个强而尖锐的正峰,与主链酰胺III CαH和NH变形有关;以及一个酰胺I双峰,低波数处为负,高波数处为正,中心位于约1658 cm⁻¹ 。在约1340 - 1380 cm⁻¹范围内的负ROA峰可能源于甘氨酸CH₂变形,似乎是β-转角的特征。我们 的结果进一步证明,与传统振动光谱(红外或拉曼光谱)相比,ROA是一种更敏锐的蛋白质构象探测手段,因为在给定的简正模式中,只有那些直接反映骨架手性的少数振动坐标才对相应的ROA谱带强度有贡献。

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