Nishimura K, Higaki T, Okamura H, Tanase S
Department of Biochemistry, Kumamoto University School of Medicine, Japan.
J Biol Chem. 1994 Oct 7;269(40):24712-8.
A notable feature of porcine cytosolic aspartate aminotransferase is the closure of the active site cleft by a mobile amino-terminal segment (residues 15-40) upon binding substrate. The functional roles of Val17 and Phe18, residues that are part of the mobile loop, have been studied in the site-directed mutants in which the size and hydrophobic nature of these residues have been changed. Absorption, circular dichroism spectra, susceptibility to protease 401, and thermal stability did not differ appreciably between wild type and mutant enzymes. In the overall transamination between aspartate and 2-oxoglutarate, V17A represented a typical Km mutant while V17I retained the substrate binding affinity fairly well. In contrast, replacement of Phe18 by Ala resulted in a large decrease in both catalytic rate and binding affinity for substrates. F18W, F18Y, and F18H showed a moderate decrease in kcat and a considerable increase in Km values. Single-turnover reactions with four individual substrates yielded analogous results to those obtained for the overall reaction and, in addition, revealed that k/Kd values of mutants F18A and F18H were over 10 times lower for C5 substrates (glutamate and 2-oxoglutarate) than those for C4 substrates (aspartate and oxalacetate). All mutant enzymes showed variously increased Kd values for substrate analogs such as 2-methylaspartate, succinate, and glutarate. 1H NMR observations of F18H, in which His18 served as a built-in probe, were in accord with the behavior that would be expected from the conformational transition. We conclude that, although Val17 and Phe18 may not be essential for catalysis, the presence of a bulky residue of appropriate size at each position is critical for productive binding of substrate.
猪胞质天冬氨酸转氨酶的一个显著特征是,在结合底物时,其活性位点裂缝会被一个可移动的氨基末端片段(第15 - 40位残基)封闭。Val17和Phe18是这个可移动环的组成残基,已对其在定点突变体中的功能作用进行了研究,在这些突变体中,这些残基的大小和疏水性已发生改变。野生型和突变型酶在吸收光谱、圆二色光谱、对蛋白酶401的敏感性以及热稳定性方面没有明显差异。在天冬氨酸和2 - 氧代戊二酸的总体转氨反应中,V17A是典型的Km突变体,而V17I相当好地保留了底物结合亲和力。相比之下,用Ala取代Phe18导致催化速率和对底物的结合亲和力大幅下降。F18W、F18Y和F18H的kcat适度下降,Km值显著增加。与四种单个底物的单周转反应产生了与总体反应类似的结果,此外,还表明突变体F18A和F18H对C5底物(谷氨酸和2 - 氧代戊二酸)的k/Kd值比对C4底物(天冬氨酸和草酰乙酸)低10倍以上。所有突变酶对底物类似物如2 - 甲基天冬氨酸、琥珀酸和戊二酸的Kd值都有不同程度的增加。对F18H进行的1H NMR观察(其中His18作为内置探针)与构象转变预期的行为一致。我们得出结论,虽然Val17和Phe18对于催化可能不是必需的,但每个位置存在适当大小的大体积残基对于底物的有效结合至关重要。