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天冬氨酸222在大肠杆菌天冬氨酸转氨酶催化机制中的作用:增强与酶结合的辅酶磷酸吡哆醛功能的氨基酸残基。

Role of Asp222 in the catalytic mechanism of Escherichia coli aspartate aminotransferase: the amino acid residue which enhances the function of the enzyme-bound coenzyme pyridoxal 5'-phosphate.

作者信息

Yano T, Kuramitsu S, Tanase S, Morino Y, Kagamiyama H

机构信息

Department of Medical Chemistry, Osaka Medical College, Japan.

出版信息

Biochemistry. 1992 Jun 30;31(25):5878-87. doi: 10.1021/bi00140a025.

DOI:10.1021/bi00140a025
PMID:1610831
Abstract

Asp222 is an invariant residue in all known sequences of aspartate aminotransferases from a variety of sources and is located within a distance of strong ionic interaction with N(1) of the coenzyme, pyridoxal 5'-phosphate (PLP), or pyridoxamine 5'-phosphate (PMP). This residue of Escherichia coli aspartate aminotransferase was replaced by Ala, Asn, or Glu by site-directed mutagenesis. The PLP form of the mutant enzyme D222E showed pH-dependent spectral changes with a pKa value of 6.44 for the protonation of the internal aldimine bond, slightly lower than that (6.7) for the wild-type enzyme. In contrast, the internal aldimine bond in the D222A or D222N enzyme did not titrate over the pH range 5.3-9.5, and a 430-nm band attributed to the protonated aldimine persisted even at high pH. The binding affinity of the D222A and D222N enzymes for PMP decreased by 3 orders of magnitude as compared to that of the wild-type enzyme. Pre-steady-state half-transamination reactions of all the mutant enzymes with substrates exhibited anomalous progress curves comprising multiphasic exponential processes, which were accounted for by postulating several kinetically different enzyme species for both the PLP and PMP forms of each mutant enzyme. While the replacement of Asp222 by Glu yielded fairly active enzyme species, the replacement by Ala and Asn resulted in 8600- and 20,000-fold decreases, respectively, in the catalytic efficiency (kmax/Kd value for the most active species of each mutant enzyme) in the reactions of the PLP form with aspartate. In contrast, the catalytic efficiency of the PMP form of the D222A or D222N enzyme with 2-oxoglutarate was still retained at a level as high as 2-10% of that of the wild-type enzyme. The presteady-state reactions of these two mutant enzymes with [2-2H]aspartate revealed a deuterium isotope effect (kH/kD = 6.0) greater than that [kH/kD = 2.2; Kuramitsu, S., Hiromi, K., Hayashi, H., Morino, Y., & Kagamiyama, H. (1990) Biochemistry 29, 5469-5476] for the wild-type enzyme. These findings indicate that the presence of a negatively charged residue at position 222 is particularly critical for the withdrawal of the alpha-proton of the amino acid substrate and accelerates this rate-determining step by about 5 kcal.mol-1. Thus it is concluded that Asp222 serves as a protein ligand tethering the coenzyme in a productive mode within the active site and stabilizes the protonated N(1) of the coenzyme to strengthen the electron-withdrawing capacity of the coenzyme.

摘要

天冬氨酸转氨酶(Asp222)在来自多种来源的所有已知天冬氨酸转氨酶序列中都是一个不变残基,并且位于与辅酶5'-磷酸吡哆醛(PLP)或5'-磷酸吡哆胺(PMP)的N(1)有强离子相互作用的距离范围内。通过定点诱变将大肠杆菌天冬氨酸转氨酶的这个残基替换为丙氨酸(Ala)、天冬酰胺(Asn)或谷氨酸(Glu)。突变酶D222E的PLP形式显示出pH依赖性光谱变化,内部醛亚胺键质子化的pKa值为6.44,略低于野生型酶的pKa值(6.7)。相比之下,D222A或D222N酶中的内部醛亚胺键在pH 5.3 - 9.5范围内没有滴定,并且即使在高pH下,归属于质子化醛亚胺的430 nm条带仍然存在。与野生型酶相比,D222A和D222N酶对PMP的结合亲和力降低了3个数量级。所有突变酶与底物的稳态前半转氨反应表现出异常的进程曲线,包括多相指数过程,这是通过为每个突变酶的PLP和PMP形式假定几种动力学上不同的酶物种来解释的。虽然用Glu替换Asp222产生了相当有活性的酶物种,但用Ala和Asn替换分别导致PLP形式与天冬氨酸反应的催化效率(每个突变酶最活性物种的kmax/Kd值)降低了8600倍和20000倍。相比之下,D222A或D222N酶的PMP形式与2-氧代戊二酸反应的催化效率仍保留在野生型酶的2 - 10%的高水平。这两种突变酶与[2-2H]天冬氨酸的稳态前反应显示出氘同位素效应(kH/kD = 6.0),大于野生型酶的氘同位素效应[kH/kD = 2.2;Kuramitsu, S., Hiromi, K., Hayashi, H., Morino, Y., & Kagamiyama, H. (1990) Biochemistry 29, 5469 - 5476]。这些发现表明,222位带负电荷残基的存在对于氨基酸底物α-质子的离去特别关键,并将这个速率决定步骤加速了约5千卡·摩尔-1。因此可以得出结论,Asp222作为一种蛋白质配体,以一种有效的模式将辅酶束缚在活性位点内,并稳定辅酶的质子化N(1)以增强辅酶的吸电子能力。

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