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人白细胞介素-8受体A和B的基因组组织及启动子功能比较

Comparison of the genomic organization and promoter function for human interleukin-8 receptors A and B.

作者信息

Ahuja S K, Shetty A, Tiffany H L, Murphy P M

机构信息

Laboratory of Host Defenses, NIAID, National Institutes of Health, Bethesda, Maryland 20892.

出版信息

J Biol Chem. 1994 Oct 21;269(42):26381-9.

PMID:7929358
Abstract

Human neutrophils are highly responsive to the chemokine interleukin-8 (IL-8) owing to high levels of expression of two related receptors encoded by the single copy genes il8ra and il8rb located on chromosome 2q34-q35. To identify nuclear factors that regulate the expression of IL-8 receptors, we have first defined the organization of both genes and characterized their functional promoters. il8ra and il8rb span approximately 4 and 12 kilobase pairs of genomic DNA, respectively. In both cases, the open reading frame resides on a single exon. In contrast, the 5'-untranslated regions are more complex. For il8ra, it is formed from two exons, whereas for il8rb, seven distinct neutrophil mRNAs are formed by alternative splicing of 11 exons. One of the splice variants, designated IL8RB3, is the predominant form for il8rb. Two equally abundant mRNAs for il8ra, 2.0 and 2.4 kilobases in length, are expressed in neutrophils and arise from usage of two alternative polyadenylation signals. Primer extension analysis identified two major transcription start points for il8ra and 11 for il8rb. Regions extending 300 base pairs (bp) upstream from exon 1 of il8ra and 81 bp upstream from exon 3 of il8rb have limited sequence similarity but had strong constitutive promoter activity when cloned upstream from a chloramphenicol acetyltransferase-encoding reporter gene and transiently transfected into surrogate myeloid (HL-60, and U-937) and lymphoid (Jurkat) cell lines. Neither of these regions has sequences corresponding to classic promoter elements. In contrast, a region 643 base pairs upstream from exon 1 of il8rb had relatively low levels of constitutive promoter activity in all three cell environments, and a conserved TATA element is located 47 bp upstream of the 5'-end of exon 1. Thus, despite marked differences in the complexity of their genomic organization, il8ra and il8rb encode products that are similar in structure, function, and the major cell type of expression.

摘要

由于位于2号染色体q34 - q35上的单拷贝基因il8ra和il8rb编码的两种相关受体表达水平较高,人类中性粒细胞对趋化因子白细胞介素 - 8(IL - 8)高度敏感。为了鉴定调控IL - 8受体表达的核因子,我们首先确定了这两个基因的结构并对其功能启动子进行了表征。il8ra和il8rb分别跨越约4和12千碱基对的基因组DNA。在这两种情况下,开放阅读框都位于单个外显子上。相比之下,5' - 非翻译区更为复杂。对于il8ra,它由两个外显子组成,而对于il8rb,通过11个外显子的可变剪接形成7种不同的中性粒细胞mRNA。其中一种剪接变体,命名为IL8RB3,是il8rb的主要形式。il8ra有两种长度分别为2.0和2.4千碱基的等量丰富mRNA,在中性粒细胞中表达,它们来自两种不同聚腺苷酸化信号的使用。引物延伸分析确定了il8ra的两个主要转录起始点和il8rb的11个转录起始点。从il8ra外显子1上游延伸300个碱基对(bp)和从il8rb外显子3上游延伸81 bp的区域具有有限的序列相似性,但当克隆到编码氯霉素乙酰转移酶的报告基因上游并瞬时转染到替代髓系(HL - 60和U -

937)和淋巴系(Jurkat)细胞系中时,具有很强的组成型启动子活性。这两个区域都没有与经典启动子元件相对应的序列。相比之下,il8rb外显子1上游643个碱基对的区域在所有三种细胞环境中组成型启动子活性水平相对较低,并且一个保守的TATA元件位于外显子1 5' - 末端上游47 bp处。因此,尽管它们的基因组结构复杂性存在明显差异,但il8ra和il8rb编码的产物在结构、功能和主要表达细胞类型方面相似。

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