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丁香假单胞菌番茄致病变种PT23的两个天然质粒含有大量重复DNA,包括复制序列。

Two native plasmids of Pseudomonas syringae pathovar tomato strain PT23 share a large amount of repeated DNA, including replication sequences.

作者信息

Murillo J, Keen N T

机构信息

Departamento de Producción Agraria, Universidad Pública de Navarra, Pamplona, Spain.

出版信息

Mol Microbiol. 1994 Jun;12(6):941-50. doi: 10.1111/j.1365-2958.1994.tb01082.x.

Abstract

Strain PT23 of Pseudomonas syringae pv. tomato contains four native plasmids, designated A, B, C, and D. By DNA hybridization of genomic and plasmid DNA digests from the wild type and a plasmid-cured strain, we determined that c. 61 kb (c. 74%) of pPT23B is repeated in pPT23 A and only c. 17 kb (c. 21%) is in single copy in strain PT23. pPT23B also contains DNA repeated in the chromosome that occurs in three DNA fragments of 0.6, 4.6, and 9.6 kb that might be transposable elements. Additionally, the 9.6 kb fragment also shares sequences with the three other plasmids of strain PT23. By DNA hybridization with the origin of replication from a native plasmid of P. syringae pv. syringae and in vivo replication tests, we identified the origins of replication of plasmids A, B, and D and showed that they cross-hybridize. The putative par region from pPT23 A has also been identified and is not conserved in the other three native plasmids from strain PT23. By using the defined minimal origin of replication from pPT23 A as a probe, we showed that it is highly conserved in 14 strains belonging to nine different pathovars of P. syringae and that as many as five different native plasmids with closely related origins of replication coexist in the same cell. The duplication and reorganization of plasmids might therefore occur at high frequency and could be responsible for the existence of large numbers of native plasmids in P. syringae strains.

摘要

丁香假单胞菌番茄致病变种的PT23菌株含有四个天然质粒,分别命名为A、B、C和D。通过对野生型菌株和质粒消除菌株的基因组DNA及质粒DNA酶切片段进行DNA杂交,我们确定pPT23B约61 kb(约74%)的片段在pPT23A中重复,而在PT23菌株中只有约17 kb(约21%)是单拷贝的。pPT23B还含有在染色体中重复的DNA,这些DNA存在于0.6、4.6和9.6 kb的三个DNA片段中,可能是可移动元件。此外,9.6 kb的片段也与PT23菌株的其他三个质粒共享序列。通过与丁香假单胞菌丁香致病变种天然质粒的复制起点进行DNA杂交及体内复制试验,我们鉴定了质粒A、B和D的复制起点,并表明它们会交叉杂交。pPT23A的假定par区域也已被鉴定,且在PT23菌株的其他三个天然质粒中不保守。通过使用pPT23A定义的最小复制起点作为探针,我们发现它在属于丁香假单胞菌九个不同致病型的14个菌株中高度保守,并且在同一细胞中可能共存多达五个具有密切相关复制起点的不同天然质粒。因此,质粒的重复和重组可能高频发生,这可能是丁香假单胞菌菌株中存在大量天然质粒的原因。

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