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人类2号染色体短臂区域特异性显微切割文库和单拷贝微克隆的构建与鉴定

Construction and characterization of region-specific microdissection libraries and single-copy microclones for short arm of human chromosome 2.

作者信息

Yu J, Tong S, Qi J, Kao F T

机构信息

Eleanor Roosevelt Institute for Cancer Research, Denver, Colorado 80206.

出版信息

Somat Cell Mol Genet. 1994 Jul;20(4):353-7. doi: 10.1007/BF02254724.

DOI:10.1007/BF02254724
PMID:7974010
Abstract

The short arm of human chromosome 2, comprising approximately 93 million bp, has been divided into four regions to construct region-specific microdissection libraries to facilitate physical mapping and gene cloning. These four regions include 2p23-p25 (designated 2P1), 2p21-p23 (2P2), 2p14-p16 (2P3), and 2p11-p13 (2P4). Together with three previously constructed microdissection libraries of 2P1, 2P2 and 2P4, a fourth library for the region 2p14-p16 (2P3) has been constructed and characterized to complete all four region-specific libraries for the entire 2p. The 2P3 library is very large, potentially comprising 1,000,000 recombinant microclones with insert sizes ranging between 50 and 800 bp and a mean of 250 bp. Approximately 40% of the microclones contain unique sequences. Of the 77 single-copy microclones analyzed, 66 clones (86%) hybridized to both human and chromosome 2 DNAs, indicating that they were derived from human and are chromosome 2 specific. The hybridizing HindIII genomic fragments for the 66 microclones have also been determined.

摘要

人类2号染色体的短臂约含9300万个碱基对,已被划分为四个区域,用于构建区域特异性显微切割文库,以促进物理图谱绘制和基因克隆。这四个区域包括2p23 - p25(命名为2P1)、2p21 - p23(2P2)、2p14 - p16(2P3)和2p11 - p13(2P4)。连同之前构建的2P1、2P2和2P4的三个显微切割文库,已构建并鉴定了2p14 - p16区域(2P3)的第四个文库,以完成整个2p的所有四个区域特异性文库。2P3文库非常大,可能包含100万个重组微克隆,插入片段大小在50至800碱基对之间,平均为250碱基对。大约40%的微克隆含有独特序列。在分析的77个单拷贝微克隆中,66个克隆(86%)与人DNA和2号染色体DNA都杂交,表明它们源自人类且具有2号染色体特异性。还确定了这66个微克隆的杂交HindIII基因组片段。

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