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具有随机迁移的亚种群系统中的空间和时空相关性。

Spatial and space-time correlations in systems of subpopulations with stochastic migration.

作者信息

Epperson B K

机构信息

Department of Botany and Plant Sciences, University of California, Riverside 92521.

出版信息

Theor Popul Biol. 1994 Oct;46(2):160-97. doi: 10.1006/tpbi.1994.1024.

Abstract

The great majority of models of the population genetics of subdivided populations have made the simplifying assumption that the gene frequencies in migrant groups are deterministic. The present paper examines models which more closely mimic natural conditions, in which the gene frequencies in migrant groups are subject to stochastic effects. It is shown that some types of stochastic migration can cause dramatic changes in spatial correlations and variance. These changes depend on how the stochastic migration effects in the gene frequency recursion equations are shared among nearby subpopulations during the same generation. Only for cases where the effects are completely unshared are the equilibrium spatial and space-time correlations among adult subpopulations unaffected, but the variance is always inflated. The analyses here use novel methods, by recasting population genetic migration-drift models as space-time autoregressive moving average (STARMA) processes. Recent theorems for STARMA processes are employed for finding the spatial correlations, and for the first time in population genetics theory the complete set of space-time correlations, for systems with general patterns of migration rates and numbers of spatial dimensions. The space-time correlations provide a uniquely detailed description of a system, and thus form a link between observed spatial autocorrelation statistics and the underlying space-time population genetic process. STARMA theoretical processes have direct statistical analogues that can be applied for process identification, parameter estimation, model fitting, and forecasting in real systems.

摘要

绝大多数关于细分种群的群体遗传学模型都做了一个简化假设,即迁移群体中的基因频率是确定性的。本文研究了更贴近自然条件的模型,其中迁移群体中的基因频率受随机效应影响。结果表明,某些类型的随机迁移会导致空间相关性和方差发生显著变化。这些变化取决于在同一代中,基因频率递归方程中的随机迁移效应在附近亚种群之间是如何分配的。只有在效应完全不共享的情况下,成年亚种群之间的平衡空间和时空相关性才不会受到影响,但方差总是会增大。本文的分析使用了新颖的方法,即将群体遗传迁移 - 漂变模型重塑为时空自回归移动平均(STARMA)过程。利用STARMA过程的最新定理来寻找空间相关性,并且在群体遗传学理论中首次针对具有一般迁移率模式和空间维度数量的系统,求出了完整的时空相关性集合。时空相关性提供了对一个系统独特而详细的描述,从而在观察到的空间自相关统计量与潜在的时空群体遗传过程之间建立了联系。STARMA理论过程具有直接的统计类似物,可应用于实际系统中的过程识别、参数估计、模型拟合和预测。

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