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来自嗜盐嗜碱菌的新型离子泵视紫红质形成了一个独立于细菌视紫红质和古细菌视紫红质家族/类群的家族。

The novel ion pump rhodopsins from Haloarcula form a family independent from both the bacteriorhodopsin and archaerhodopsin families/tribes.

作者信息

Tateno M, Ihara K, Mukohata Y

机构信息

Department of Biology, School of Science, Nagoya University, Japan.

出版信息

Arch Biochem Biophys. 1994 Nov 15;315(1):127-32. doi: 10.1006/abbi.1994.1480.

Abstract

Extreme halophiles newly collected from Argentine salt flats were characterized, in one of which, Haloarcula (sp. arg-1), light-driven retinal protein ion pumps were found. The proton pump, cruxrhodopsin-1, shows amino acid sequence homologies of 52% to bacteriorhodopsin and 48% to archaerhodopsin-1. The anion pump, cruxhalorhodopsin-1, identified partially as a 394bp polymerase chain reaction product, shows homologies of 70% to halorhodopsin, and 72% to pharaonis halorhodopsin. The ion pumps (and possibly sensors still to be found) in Haloarcula sp. arg-1, which constitute the cruxrhodopsin-1 family, are distinct from the bacteriorhodopsin and the archaerhodopsin families/tribes.

摘要

对从阿根廷盐沼新采集的嗜盐菌进行了特性分析,其中一种名为嗜盐碱杆菌属(菌株arg-1)的嗜盐菌中发现了光驱动的视黄醛蛋白离子泵。质子泵cruxrhodopsin-1与细菌视紫红质的氨基酸序列同源性为52%,与古菌视紫红质-1的同源性为48%。阴离子泵cruxhalorhodopsin-1经部分鉴定为394bp聚合酶链反应产物,与盐视紫红质的同源性为70%,与法老盐视紫红质的同源性为72%。嗜盐碱杆菌属菌株arg-1中的离子泵(以及可能仍有待发现的传感器)构成了cruxrhodopsin-1家族,与细菌视紫红质和古菌视紫红质家族/类群不同。

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