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通过电喷雾电离质谱监测α-螺旋和β-折叠的氘交换。

Deuterium exchange of alpha-helices and beta-sheets as monitored by electrospray ionization mass spectrometry.

作者信息

Wagner D S, Melton L G, Yan Y, Erickson B W, Anderegg R J

机构信息

Glaxo Research Institute, Research Triangle Park, North Carolina 27709.

出版信息

Protein Sci. 1994 Aug;3(8):1305-14. doi: 10.1002/pro.5560030817.

DOI:10.1002/pro.5560030817
PMID:7987225
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2142910/
Abstract

Deuterium exchange was monitored by electrospray ionization mass spectrometry (ESI-MS) to study the slowly exchanging (hydrogen bonded) peptide hydrogens of several alpha-helical peptides and beta-sheet proteins. Polypeptides were synthetically engineered to have mainly disordered, alpha-helical, or beta-sheet structure. For 3 isomeric 31-residue alpha-helical peptides, the number of slowly exchanging hydrogens as measured by ESI-MS in 50% CF3CD2OD (pD 9.5) provided estimates of their alpha-helicities (26%, 40%, 94%) that agreed well with the values (17%, 34%, 98%) measured by circular dichroic spectroscopy in the same nondeuterated solvent. For 3 betabellins containing a pair of beta-sheets and a related disordered peptide, their order of structural stability (12D > 12S > 14D > 14S) shown by their deuterium exchange rates in 10% CD3OD/0.5% CD3CO2D (pD 3.8) as measured by ESI-MS was the same as their order of structural stability to unfolding with increasing temperature or guanidinium chloride concentration as measured by circular dichroic spectroscopy in water. Compared to monitoring deuterium exchange by proton NMR spectrometry, monitoring deuterium exchange by ESI-MS requires much less sample (1-50 micrograms), much shorter analysis time (10-90 min), and no chemical quenching of the exchange reaction.

摘要

通过电喷雾电离质谱法(ESI-MS)监测氘交换,以研究几种α-螺旋肽和β-折叠蛋白中缓慢交换(氢键结合)的肽氢。对多肽进行合成改造,使其主要具有无序、α-螺旋或β-折叠结构。对于3种异构体的31个残基的α-螺旋肽,在50% CF3CD2OD(pD 9.5)中通过ESI-MS测量的缓慢交换氢的数量提供了它们α-螺旋度的估计值(26%、40%、94%),这与在相同非氘代溶剂中通过圆二色光谱法测量的值(17%、34%、98%)非常吻合。对于3种含有一对β-折叠的β-珠蛋白和一种相关的无序肽,通过ESI-MS在10% CD3OD/0.5% CD3CO2D(pD 3.8)中测量的氘交换率所显示的它们的结构稳定性顺序(12D > 12S > 14D > 14S)与通过圆二色光谱法在水中测量的它们随温度或氯化胍浓度升高而展开的结构稳定性顺序相同。与通过质子核磁共振光谱法监测氘交换相比,通过ESI-MS监测氘交换所需的样品量少得多(1 - 50微克),分析时间短得多(10 - 90分钟),并且无需对交换反应进行化学淬灭。

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本文引用的文献

1
Determination of amide hydrogen exchange by mass spectrometry: a new tool for protein structure elucidation.通过质谱法测定酰胺氢交换:一种阐明蛋白质结构的新工具。
Protein Sci. 1993 Apr;2(4):522-31. doi: 10.1002/pro.5560020404.
2
Heat-induced conformational changes in proteins studied by electrospray ionization mass spectrometry.通过电喷雾电离质谱法研究热诱导蛋白质的构象变化。
Anal Chem. 1993 Jan 1;65(1):1-6. doi: 10.1021/ac00049a003.
3
Free energies for refolding of the common beta turn into the inverse-common beta turn: simulation of the role of D/L chirality.普通β-转角重折叠为反向普通β-转角的自由能:D/L手性作用的模拟
Proc Natl Acad Sci U S A. 1993 Aug 15;90(16):7898-902. doi: 10.1073/pnas.90.16.7898.
4
Detection of transient protein folding populations by mass spectrometry.通过质谱法检测瞬时蛋白质折叠群体
Science. 1993 Nov 5;262(5135):896-900. doi: 10.1126/science.8235611.
5
Conformation of cytochrome c studied by deuterium exchange-electrospray ionization mass spectrometry.通过氘交换-电喷雾电离质谱法研究细胞色素c的构象
Anal Chem. 1994 Mar 1;66(5):706-11. doi: 10.1021/ac00077a020.
6
Engineering of betabellin 14D: disulfide-induced folding of a beta-sheet protein.β-贝林14D的工程改造:二硫键诱导的β-折叠蛋白折叠
Protein Sci. 1994 Jul;3(7):1069-73. doi: 10.1002/pro.5560030709.
7
The pH dependence of hydrogen exchange in proteins.
J Biol Chem. 1983 Mar 10;258(5):3039-44.
8
Hydrogen exchange and the dynamic structure of proteins.氢交换与蛋白质的动态结构
Mol Cell Biochem. 1982 Oct 29;48(3):135-60. doi: 10.1007/BF00421225.
9
Amide protein exchange and surface conformation of the basic pancreatic trypsin inhibitor in solution. Studies with two-dimensional nuclear magnetic resonance.溶液中碱性胰蛋白酶抑制剂的酰胺蛋白交换与表面构象。二维核磁共振研究。
J Mol Biol. 1982 Sep 15;160(2):343-61. doi: 10.1016/0022-2836(82)90180-2.
10
Influence of charge on the rate of amide proton exchange.电荷对酰胺质子交换速率的影响。
Biochemistry. 1982 Jan 5;21(1):1-5. doi: 10.1021/bi00530a001.