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2
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A designed metal-binding protein with a novel fold.一种具有新型折叠结构的设计金属结合蛋白。
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2
Free energies for refolding of the common beta turn into the inverse-common beta turn: simulation of the role of D/L chirality.普通β-转角重折叠为反向普通β-转角的自由能:D/L手性作用的模拟
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Re: "Conditions for confounding of the risk ratio and of the odds ratio".主题:“风险比和比值比的混杂条件”
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Protein design using model synthetic peptides.使用模型合成肽进行蛋白质设计。
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Design and synthesis of a peptide having chymotrypsin-like esterase activity.具有胰凝乳蛋白酶样酯酶活性的肽的设计与合成。
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β-贝林14D的工程改造:二硫键诱导的β-折叠蛋白折叠

Engineering of betabellin 14D: disulfide-induced folding of a beta-sheet protein.

作者信息

Yan Y, Erickson B W

机构信息

Department of Chemistry, University of North Carolina at Chapel Hill, 27599.

出版信息

Protein Sci. 1994 Jul;3(7):1069-73. doi: 10.1002/pro.5560030709.

DOI:10.1002/pro.5560030709
PMID:7920252
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2142894/
Abstract

The betabellin target structure consists of 2 32-residue beta sheets packed against each other by hydrophobic interactions. We have designed, chemically synthesized, and biophysically characterized betabellin 14S, a single chain, and betabellin 14D, the disulfide-bridged double chain. The 32-residue nongenetic betabellin-14 chain (HSLTASIkaLTIHVQakTATCQVkaYTVHISE, a = D-Ala, k = D-Lys) has a palindromic pattern of polar (p), nonpolar (n), end (e), and beta-turn (t,r) residues (epnpnpnttnpnpnprrpnpnpnttnpnpnpe). Each half contains the same 14-residue palindromic pattern (underlined). Pairs of D-amino acid residues are used to favor formation of inverse-common (type-I') beta turns. In water at pH 6.5, the single chain of betabellin 14S is not folded, but the disulfide-linked betabellin 14D is folded into a stable beta-sheet structure. Thus, folding of the covalent dimer beta-bellin 14D is induced by formation of the single interchain disulfide bond. The binary pattern of alternating polar and nonpolar residues of its beta-sheets is not sufficient to induce folding. Betabellin 14D is a very water-soluble (10 mg/mL), small (64 residues), nongenetic (12 D residues) beta-sheet protein with properties (well-dispersed proton NMR resonances; Tm = 58 degrees C and delta Hm = 106 kcal/mol at pH 5.5) like those of a native protein structure.

摘要

β-贝塔琳的目标结构由两条32个残基的β折叠片层通过疏水相互作用相互堆积而成。我们设计、化学合成并通过生物物理方法表征了单链的β-贝塔琳14S和二硫键连接的双链β-贝塔琳14D。32个残基的非基因β-贝塔琳-14链(HSLTASIkaLTIHVQakTATCQVkaYTVHISE,a = D-丙氨酸,k = D-赖氨酸)具有极性(p)、非极性(n)、末端(e)和β-转角(t,r)残基的回文模式(epnpnpnttnpnpnprrpnpnpnttnpnpnpe)。每一半都包含相同的14个残基回文模式(下划线部分)。使用D-氨基酸残基对有利于形成反向常见(I'型)β-转角。在pH 6.5的水中,β-贝塔琳14S的单链没有折叠,但二硫键连接的β-贝塔琳14D折叠成稳定的β-折叠片层结构。因此,共价二聚体β-贝塔琳14D的折叠是由单个链间二硫键的形成诱导的。其β-折叠片层中交替的极性和非极性残基的二元模式不足以诱导折叠。β-贝塔琳14D是一种非常水溶性(10 mg/mL)、小(64个残基)、非基因(12个D残基)的β-折叠片层蛋白,具有类似于天然蛋白质结构的性质(质子NMR共振分散良好;在pH 5.5时,Tm = 58℃,ΔHm = 106 kcal/mol)。