Venugopal M G, Ramshaw J A, Braswell E, Zhu D, Brodsky B
Department of Biochemistry, UMDNJ-Robert Wood Johnson Medical School, Piscataway 08854.
Biochemistry. 1994 Jun 28;33(25):7948-56. doi: 10.1021/bi00191a023.
Collagen-like peptides with potential for ion pair formation were studied to investigate the role of electrostatic interactions in the triple-helix conformation. Three peptides--(POG)10, the EK-containing peptide (POG)4EKG(POG)5, and T3-487, a peptide with 18 residues of type III collagen and a C-terminal (GPO)4 tail--all form stable triple helices in aqueous solution, with melting temperatures of 58, 46, and 26 degrees C, respectively, at neutral pH. The thermal stabilities of these peptides correlate with their imino acid content, which is 66%, 60%, and 41%, respectively. Variation of pH over the range of 1-13 led to 8-9 degrees C changes in the Tm of the EK-containing peptide and peptide T3-487, with the greatest stability seen at pH values where both acidic and basic residues are ionized. Equilibrium ultracentrifugation shows these peptides are largely trimeric at low temperature, with no hexamers or larger aggregates, indicating that the pH-dependent stability arises from intramolecular interaction. Computer modeling indicates both intrachain ion pairs and interchain ion pairs can form and stabilize the triple helix. Studies of the pH dependence of the thermal stability of (POG)10 and the N-terminal acetylated form of T3-487 indicate that repulsion of the three charged N-terminal or C-terminal ends has a destabilizing effect. Taking into account these end effects, the energy contribution of two oppositely charged residues in a triple helix which are sterically capable of participating in ion pairs and backbone hydrogen bonding is 0.5-1 kcal/mol ion pair. It is possible that the stabilizing influence of ion pairs arises indirectly, through elimination of like charge repulsion, formation of ion pairs in the single chain form, or solvent effects.
对具有形成离子对潜力的类胶原蛋白肽进行了研究,以探讨静电相互作用在三螺旋构象中的作用。三种肽——(POG)10、含EK的肽(POG)4EKG(POG)5和T3 - 487(一种具有18个III型胶原残基和C端(GPO)4尾巴的肽)——在中性pH值的水溶液中均形成稳定的三螺旋,其解链温度分别为58、46和26摄氏度。这些肽的热稳定性与其亚氨基酸含量相关,亚氨基酸含量分别为66%、60%和41%。在1 - 13的pH范围内变化导致含EK的肽和肽T3 - 487的解链温度变化8 - 9摄氏度,在酸性和碱性残基均电离的pH值下稳定性最高。平衡超速离心表明这些肽在低温下主要以三聚体形式存在,没有六聚体或更大的聚集体,这表明pH依赖性稳定性源于分子内相互作用。计算机建模表明链内离子对和链间离子对均可形成并稳定三螺旋。对(POG)10和T3 - 487的N端乙酰化形式的热稳定性的pH依赖性研究表明,三个带电荷的N端或C端的排斥具有去稳定作用。考虑到这些末端效应,在空间上能够参与离子对和主链氢键形成的三螺旋中两个带相反电荷残基的能量贡献为0.5 - 1千卡/摩尔离子对。离子对的稳定作用可能是通过消除同性电荷排斥、以单链形式形成离子对或溶剂效应间接产生的。