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由竞争性抑制剂琥珀酸引发的天冬氨酸转氨甲酰酶四级结构变化的动力学

Kinetics of the quaternary structure change of aspartate transcarbamylase triggered by succinate, a competitive inhibitor.

作者信息

Tsuruta H, Vachette P, Sano T, Moody M F, Amemiya Y, Wakabayashi K, Kihara H

机构信息

Stanford Synchrotron Radiation Laboratory, SLAC, California 94309-0210.

出版信息

Biochemistry. 1994 Aug 23;33(33):10007-12. doi: 10.1021/bi00199a026.

Abstract

The quaternary structural change of Escherichia coli aspartate transcarbamylase (ATCase) was studied by time-resolved X-ray solution scattering following the binding of carbamoyl phosphate and of succinate, a competitive inhibitor of the natural substrate L-aspartate. Stopped-flow experiments at sub-zero temperatures in the presence of 30% ethylene glycol allowed us to monitor the evolution of the scattering pattern, including the characteristic scattering peak in an s (=2 sin theta/lambda) range of 0.01-0.06 A-1. The inhibitor binding promotes a quaternary structure change from the T state toward the R state, and as expected for a simple ligand binding process, ATCase remains in the R state, unlike the physiological enzyme reaction [Tsuruta, H., et al. (1990) FEBS Lett. 263, 66-68]. After equilibrium had been established, the final scattering pattern was recorded. When the succinate concentration was sufficiently high, this pattern was the same as that given by ATCase saturated with the bisubstrate analogue N-phosphonoacetyl-L-aspartate (PALA). This implies that, under cryogenic conditions, succinate and carbamoyl phosphate promote the same quaternary structure change as PALA, which is in good agreement with the crystallographic studies of Gouaux and Lipscomb [Gouaux, J.E., & Lipscomb, W.N. (1988) Proc. Natl. Acad. Sci. U.S.A. 85, 4205-4208]. Scattering patterns recorded during the course of the structural transition were satisfactorily reproduced by a linear combination of the initial and final patterns, suggesting that there is no significant concentration of quaternary structure intermediates between the T and R states. This is consistent with a concerted structural transition of ATCase.(ABSTRACT TRUNCATED AT 250 WORDS)

摘要

通过时间分辨X射线溶液散射研究了大肠杆菌天冬氨酸转氨甲酰酶(ATCase)在氨基甲酰磷酸和琥珀酸(天然底物L-天冬氨酸的竞争性抑制剂)结合后的四级结构变化。在零下温度且存在30%乙二醇的条件下进行的停流实验,使我们能够监测散射模式的演变,包括在s(=2sinθ/λ)范围为0.01 - 0.06 Å⁻¹的特征散射峰。抑制剂结合促进了四级结构从T态向R态的转变,并且正如简单配体结合过程所预期的那样,与生理酶反应不同,ATCase保持在R态[鹤田,H.等人(1990年)《欧洲生物化学学会联合会快报》263,66 - 68]。在建立平衡后,记录最终的散射模式。当琥珀酸浓度足够高时,该模式与用双底物类似物N-膦酰基乙酰-L-天冬氨酸(PALA)饱和的ATCase所给出的模式相同。这意味着,在低温条件下,琥珀酸和氨基甲酰磷酸促进的四级结构变化与PALA相同,这与Gouaux和Lipscomb的晶体学研究结果[Gouaux,J.E.,& Lipscomb,W.N.(1988年)《美国国家科学院院刊》85,4205 - 4208]高度一致。在结构转变过程中记录的散射模式通过初始和最终模式的线性组合得到了令人满意的重现,这表明在T态和R态之间不存在显著浓度的四级结构中间体。这与ATCase的协同结构转变是一致的。(摘要截断于250字)

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