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黑腹果蝇DNA中的聚嘧啶片段:I. 一种含有聚嘧啶/聚嘌呤DNA的隐蔽卫星的检测

Polypyrimidine segments in Drosophila melanogaster DNA: I. Detection of a cryptic satellite containing polypyrimidine/polypurine DNA.

作者信息

Birnboim H C

出版信息

Cell. 1975 Jun;5(2):173-81. doi: 10.1016/0092-8674(75)90025-2.

DOI:10.1016/0092-8674(75)90025-2
PMID:806349
Abstract

Very long runs of pyrimidine nucleotides (polypyrimidines), previously detected in DNA from Drosophila melanogaster, have now been localized to a "cryptic" satellite. These polypyrimidines have an average length of 750 nucleotides and account for about 3% of the thymine residues in total DNA. The buoyant density of the DNA component which contains the polypyrimidines was detected by centrifuging native DNA to equilibrium in a CsCl gradient, and then assaying each fraction for its content of polypyrimidines. A peak was detected at adensity of about 1.707 gm/cm-3, distinctly heavier than the main band of DNA (1.702 gm/cm-3). The buoyant density of polypyrimidine-containing molecules was little affected by differences in the molecular weight of the starting DNA in the range 10-5-10-7 daltons (single-stranded). Thus polypyrimidines (and their complementary polypurines) appear to form all or part of a "cryptic" satellite. Polypyrimidines have been isolated and characterized with respect to composition and buoyant density. Direct nucleoside analysis of unlabeled material indicated 34.5% deoxycylidine, 65.5% thymidine. Their banding position in neutral and alkaline CsCl gradients was consistent with a single-stranded DNA polymer of this composition.

摘要

此前在黑腹果蝇的DNA中检测到的极长的嘧啶核苷酸链(多嘧啶链),现已定位到一种“隐蔽”卫星DNA上。这些多嘧啶链平均长度为750个核苷酸,约占总DNA中胸腺嘧啶残基的3%。通过在CsCl梯度中对天然DNA进行离心至平衡,然后检测每个组分中多嘧啶链的含量,来测定含有多嘧啶链的DNA组分的浮力密度。在密度约为1.707克/立方厘米处检测到一个峰,明显比DNA的主带(1.702克/立方厘米)重。含多嘧啶链分子的浮力密度受起始DNA分子量在10^-5 - 10^-7道尔顿(单链)范围内差异的影响很小。因此,多嘧啶链(及其互补的多嘌呤链)似乎构成了一种“隐蔽”卫星DNA的全部或部分。已对多嘧啶链进行了分离,并对其组成和浮力密度进行了表征。对未标记物质的直接核苷分析表明,其中34.5%为脱氧胞苷,65.5%为胸苷。它们在中性和碱性CsCl梯度中的条带位置与这种组成的单链DNA聚合物一致。

相似文献

1
Polypyrimidine segments in Drosophila melanogaster DNA: I. Detection of a cryptic satellite containing polypyrimidine/polypurine DNA.黑腹果蝇DNA中的聚嘧啶片段:I. 一种含有聚嘧啶/聚嘌呤DNA的隐蔽卫星的检测
Cell. 1975 Jun;5(2):173-81. doi: 10.1016/0092-8674(75)90025-2.
2
Polypyrimidine segments in Drosophila melanogaster DNA: II. Chromosome location and nucleotide sequence.黑腹果蝇DNA中的聚嘧啶片段:II. 染色体定位与核苷酸序列
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Characterization of polypyrimidines in Drosophila and L-cell DNA.果蝇和L细胞DNA中多嘧啶的特征分析。
Biochemistry. 1975 Apr 22;14(8):1643-7. doi: 10.1021/bi00679a016.
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Evolution of polypyrimidines in Drosophila.果蝇中多嘧啶的进化
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Distribution of polypyrimidine . polypurine segments in DNA from diverse organisms.
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Identification and separation of components of calf thymus DNA using a CsC1-netropsin density gradient.使用氯化铯-纺锤菌素密度梯度法鉴定和分离小牛胸腺DNA的组分。
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Post-replication repair of DNA in ultraviolet-irradiated mammalian cells. No gaps in DNA synthesized late after ultraviolet irradiation.紫外线照射的哺乳动物细胞中DNA的复制后修复。紫外线照射后晚期合成的DNA中无缺口。
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Arrangement of the highly reiterated DNA sequences in the centric heterochromatin of Drosophila melanogaster. Evidence for interspersed spacer DNA.黑腹果蝇着丝粒异染色质中高度重复DNA序列的排列。间隔DNA散布的证据。
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Satellite DNAs in the embryos of various species of the genus Drosophila.果蝇属不同物种胚胎中的卫星DNA。
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引用本文的文献

1
Analysis of DNAs from two species of the virilis group of Drosophila and implications for satellite DNA evolution.果蝇性活力组两个物种的DNA分析及其对卫星DNA进化的意义。
Chromosoma. 1982;87(5):519-34. doi: 10.1007/BF00333473.
2
Most highly repeated dispersed DNA families in the mouse genome.小鼠基因组中大多数高度重复的分散DNA家族。
Mol Cell Biol. 1984 Aug;4(8):1561-71. doi: 10.1128/mcb.4.8.1561-1571.1984.
3
Multiplicity of satellite DNA sequences in Drosophila melanogaster.黑腹果蝇中卫星DNA序列的多样性。
Proc Natl Acad Sci U S A. 1986 Feb;83(3):696-700. doi: 10.1073/pnas.83.3.696.
4
Models of triple-stranded polynucleotides with optimised stereochemistry.具有优化立体化学的三链多核苷酸模型。
Nucleic Acids Res. 1976 Oct;3(10):2459-70. doi: 10.1093/nar/3.10.2459.
5
The presence of (dA.dT)20-25 tracts in the DNA of primitive eukaryotes.原始真核生物DNA中(dA.dT)20 - 25序列的存在。
Nucleic Acids Res. 1976 Sep;3(9):2367-77. doi: 10.1093/nar/3.9.2367.